Biotechnology And Deoxyribonucleic acid

         Biotechnology And Deoxyribonucleic acid

Biotechnology is technology based on biology especially when used in agriculture food science and medicine. The United Nations Convention on Biological Diversity has come up with one of many definitions of biotechnology Biotechnology has contributed towards the exploitation of biological organisms or biological processes through modern techniques which could be profitably used in medicine agriculture animal husbandry and environmental cloning.Biotechnology is a popular term for the generic technology of the st century. Although it has been utilized for centuries in traditional production processes modern biotechnology is onlyyears old and in the last decades it has been witnessing tremendous developments. Bioengineering is the science upon which all Biotechnological applications are based. With the development of new approaches and modern techniques traditional biotechnology industries are also acquiring new horizons enabling them to improve the quality of their products and increase the productivity of their systems.Beforethe term biotechnology was primarily used in the food processing and agriculture industries. Since the s it began to be used by the Western scientific establishment to refer to laboratorybased techniques being developed in biological research such as recombinant DNA or tissue culturebased processes. In fact the term should be used in a much broader sense to describe the whole range of methods both ancient and modern used to manipulate organic materials to reach the demands of food production. So the term could be defined as The application of indigenous andor scientific knowledge to the management of parts of microorganisms or of cells and tissues of higher organisms so that these supply goods and services of use to the food industry and its consumers.

         The most practical use of biotechnology

The most practical use of biotechnology which is still present today is the cultivation of plants to produce food suitable to humans. Agriculture has been theorized to have become the dominant way of producing food since the Neolithic Revolution. The processes and methods of agriculture have been refined by other mechanical and biological sciences since its inception. Through early biotechnology farmers were able to select the best suited and highestyield crops to produce enough food to support a growing population. Other uses of biotechnology were required as crops and fields became increasingly large and difficult to maintain. Specific organisms and organism byproducts were used to fertilize restore nitrogen and control pests. Throughout the use of agriculture farmers have inadvertently altered the genetics of their crops through introducing them to new environments and breeding them with other plantsone of the first forms of biotechnology. Cultures such as those in Mesopotamia Egypt and Iran developed the process of brewing beer. It is still done by the same basic method of using malted grains containing enzymes to convert starch from grains into sugar and then adding specific yeasts to produce beer. In this process the carbohydrates in the grains were broken down into alcohols such as ethanol. Later other cultures produced the process of Lactic acid fermentation which allowed the fermentation and preservation of other forms of food. Fermentation was also used in this time period to produce leavened bread. Although the process of fermentation was not fully understood until Louis Pasteur’s work init is still the first use of biotechnology to convert a food source into another form.Combinations of plants and other organisms were used as medications in many early civilizations. Since as early asBC people began to use disabled or minute amounts of infectious agents to immunize themselves against infections. These and similar processes have been refined in modern medicine and have lead to many developments such as antibiotics vaccines and other methods of

fighting sickness.In the early twentieth century scientists gained a greater understanding of microbiology and explored ways of manufacturing specific products. InChaim Weizmann first used a pure microbiological culture in an industrial process that of manufacturing corn starch using Clostridium acetobutylicum to produce acetone which the United Kingdom desperately needed to manufacture explosives during World War I.The field of modern biotechnology is thought to have largely begun on June when the United States Supreme Court ruled that a geneticallymodified microorganism could be patented in the case of Diamond v. Chakrabarty. Indianborn Ananda Chakrabarty working for General Electric had developed a bacterium derived from the Pseudomonas genus capable of breaking down crude oil which he proposed to use in treating oil spills. A university in Florida is now studying ways to prevent tooth decay. They altered the bacteria in the tooth called Streptococcus mutans by stripping it down so it could not produce lactic acid.

          Applications

Biotechnology has applications in four major industrial areas including health care crop production and agriculture non food uses of crops e.g. biodegradable plastics vegetable oil biofuels and environmental uses. For example one application of biotechnology is the directed use of organisms for the manufacture of organic products examples include beer and milk products. Another example is using naturally present bacteria by the mining industry in bioleaching. Biotechnology is also used to recycle treat waste clean up sites contaminated by industrial activities bioremediation and also to produce biological weapons.Red biotechnology is applied to medical processes. Some examples are the designing of organisms to produce antibiotics and the engineering of genetic cures through genomic manipulation.White biotechnologyalso known as industrial biotechnology is biotechnology applied to industrial processes. An example is the designing of an organism to produce a useful chemical. Another example is the using of enzymes as industrial catalysts to either produce valuable chemicals or destroy hazardouspolluting chemicals examples using oxidoreductases are given in Feng Xu “Applications of oxidoreductases: Recent progress” Ind. Biotechnol. . White biotechnology tends to consume less in resources than traditional processes used to produce industrial goods.Green biotechnology is biotechnology applied to agricultural processes. An example is the designing of transgenic plants to grow under specific environmental conditions or in the presence or absence of certain agricultural chemicals. One hope is that green biotechnology might produce more environmentally friendly solutions than traditional industrial agriculture. An example of this is the engineering of a plant to express a pesticide thereby eliminating the need for external application of pesticides. An example of this would be Bt corn. Whether or not green biotechnology products such as this are ultimately more environmentally friendly is a topic of considerable debate.

         Deoxyribonucleic acid

Deoxyribonucleic acid DNA is a nucleic acid that contains the genetic instructions used in the development and functioning of all known living organisms. The main role of DNA molecules is the longterm storage of information and DNA is often compared to a set of blueprints since it contains the instructions needed to construct other components of cells such as proteins and RNA molecules. The DNA segments that carry this genetic information are called genes but other DNA sequences have structural purposes or are involved in regulating the use of this genetic information.Chemically DNA is a long polymer of simple units called nucleotides with a backbone made of sugars and phosphate groups joined by ester bonds. Attached to each sugar is one of four types of molecules called bases. It is the sequence of these four bases along the backbone that encodes information. This information is read using the genetic code which specifies the sequence of the amino acids within proteins. The code is read by copying stretches of DNA into the related nucleic acid RNA in a process called transcription. Most of these RNA molecules are used to synthesize proteins but others are used directly in structures such as ribosomes and spliceosomes.Within cells DNA is organized into structures called chromosomes. These chromosomes are duplicated before cells divide in a process called DNA replication. Eukaryotic organisms such as animals plants and fungi store their DNA inside the cell nucleus while in prokaryotes such as bacteria it is found in the cells cytoplasm. Within the chromosomes chromatin proteins such as histones compact and organize DNA which helps control its interactions with other proteins and thereby control which genes are transcribed.

         Physical and chemical properties

DNA is a long polymer made from repeating units called nucleotides. The DNA chain isto Ångströms widetonanometres and one nucleotide unit isÅngstroms . nanometres long. Although each individual repeating unit is very small DNA polymers can be enormous molecules containing millions of nucleotides. For instance the largest human chromosome chromosome numberismillion base pairs long.In living organisms DNA does not usually exist as a single molecule but instead as a tightlyassociated pair of molecules. These two long strands entwine like vines in the shape of a double helix. The nucleotide repeats contain both the segment of the backbone of the molecule which holds the chain together and a base which interacts with the other DNA strand in the helix. In general a base linked to a sugar is called a nucleoside and a base linked to a sugar and one or more phosphate groups is called a nucleotide. If multiple nucleotides are linked together as in DNA this polymer is referred to as a polynucleotide.The backbone of the DNA strand is made from alternating phosphate and sugar residues. The sugar in DNA is deoxyribose which is a pentose five carbon sugar. The sugars are joined together by phosphate groups that form phosphodiester bonds between the third and fifth carbon atoms of adjacent sugar rings. These asymmetric bonds mean a strand of DNA has a direction. In a double helix the direction of the nucleotides in one strand is opposite to their direction in the other strand. This arrangement of DNA strands is called antiparallel. The asymmetric ends of DNA strands are referred to as the ′ five prime and ′ three prime ends. One of the major differences between DNA and RNA is the sugar with deoxyribose being replaced by the alternative pentose sugar ribose in RNA.The DNA double helix is stabilized by hydrogen bonds between the bases attached to the two strands. The four bases found in DNA are adenine abbreviated A cytosine C guanine G and thymine T. These four bases are shown below and are attached to the sugarphosphate to form the complete nucleotide as shown for adenosine monophosphate.These bases are classified into two types adenine and guanine are fused five and sixmembered heterocyclic compounds called purines while cytosine and thymine are sixmembered rings called pyrimidines. A fifth pyrimidine base called uracil U usually takes the place of thymine in RNA and differs from thymine by lacking a methyl group on its ring. Uracil is not usually found in DNA occurring only as a breakdown product of cytosine but a very rare exception to this rule is a bacterial virus called PBS that contains uracil in its DNA. In contrast following synthesis of certain RNA molecules a significant number of the uracils are converted to thymines by the enzymatic addition of the missing methyl group. This occurs mostly on structural and enzymatic RNAs like transfer RNAs and ribosomal RNA.

         Major and minor grooves

Animation of the structure of a section of DNA. The bases lie horizontally between the two spiraling strands. Large versionThe double helix is a righthanded spiral. As the DNA strands wind around each other they leave gaps between each set of phosphate backbones revealing the sides of the bases inside see animation. There are two of these grooves twisting around the surface of the double helix: one groove the major groove isÅ wide and the other the minor groove isÅ wide. The narrowness of the minor groove means that the edges of the bases are more accessible in the major groove. As a result proteins like transcription factors that can bind to specific sequences in doublestranded DNA usually make contacts to the sides of the bases exposed in the major groove. Each type of base on one strand forms a bond with just one type of base on the other strand. This is called complementary base pairing. Here purines form hydrogen bonds to pyrimidines with A bonding only to T and C bonding only to G. This arrangement of two nucleotides binding together across the double helix is called a base pair. In a double helix the two strands are also held together via forces generated by the hydrophobic effect and pi stacking which are not influenced by the sequence of the DNA. As hydrogen bonds are not covalent they can be broken and rejoined relatively easily. The two strands of DNA in a double helix can therefore be pulled apart like a zipper either by a mechanical force or high temperature. As a result of this complementarity all the information in the doublestranded sequence of a DNA helix is duplicated on each strand which is vital in DNA replication. Indeed this reversible and specific interaction between complementary base pairs is critical for all the functions of DNA in living organisms.The two types of base pairs form different numbers of hydrogen bonds AT forming two hydrogen bonds and GC forming three hydrogen bonds see figures left. The GC base pair is therefore stronger than the AT base pair. As a result it is both the percentage of GC base pairs and the overall length of a DNA double helix that determine the strength of the association between the two strands of DNA. Long DNA helices with a high GC content have strongerinteracting strands while short helices with high AT content have weakerinteracting strands. Parts of the DNA double helix that need to separate easily such as the TATAAT Pribnow box in bacterial promoters tend to have sequences with a high AT content making the strands easier to pull apart. In the laboratory the strength of this interaction can be measured by finding the temperature required to break the hydrogen bonds their melting temperature also called Tm value. When all the base pairs in a DNA double helix melt the strands separate and exist in solution as two entirely independent molecules. These singlestranded DNA molecules have no single common shape but some conformations are more stable than others.