b-Thalassemia
constitutes one of the most serious health problems worldwide, accounting for a major
number of childhood deaths per year primarily in regions of the world endemic for malaria
(WHO, 1983). The disease results from mutations in and around the b-globin
gene located as a cluster on the short arm of chromosome #11. b-Thalassemia
is an autosomal recessive disorder characterized by microcytosis and hemolytic anemia. It
results from a variety of molecular defects that reduce (b+-thalassemia)
or abolish (b0-thalassemia) the synthesis of the b-globin chains of hemoglobin (Weatherall and Clegg, 1981).
Homozygotes and compound
heterozygotes for b-thalassemia have a wide spectrum of
clinical phenotypes, ranging from an undetectable to a life-threatening
transfusion-dependent disease (Table 1). Generally, most b-thalassemia
patients present with a severe, transfusion-dependent anemia within the first two years of
life and later suffer from the long-term consequences of iron overload (thalassemia
major). However, some other patients may have minor clinical manifestations that may not
require transfusion (thalassemia intermedia).
Heterozygous b-thalassemia
subjects (carriers) are usually asymptomatic. Their hematology is characterized by a
slight to moderate anemia with marked hypochromia, microcytosis, a slightly raised level
of the minor adult hemoglobin HbA2, and an unbalanced a/b globin chain
synthesis ratio (thalassemia minor; Lin et al., 1994).
At present, more than 180 mutations
produce b-thalassemia (Huisman et al., 1997). They affect not
only the actual amino acid coding regions of the b-globin
exons, but also sites surrounding the gene and even within the non-coding introns. Most of
these mutations cause defects in transcription, RNA splicing, RNA modification and
translation due to frameshifts and nonsense codons. Other mutations produce highly
unstable b-globin products (Huisman et al., 1997).
b-Thalassemia mutations
differ greatly in their phenotypic effects; these range from the extremely mild mutations,
which are both clinically and phenotypically silent in the heterozygous state (silent b-thalassemia; Rosatelli et al., 1994), to those which are rare and
produce a phenotype of thalassemia intermedia due to the inheritance of a single copy of
abnormal gene (dominant b-thalassemia; Thein, 1992). Between
these two extremes lie the majority of b-thalassemia mutations
whose carriers are asymptomatic, whereas homozygotes and compound heterozygotes suffer
from a transfusion dependent anemia (reviewed by Weatherall et al., 1989).
The first two patients with b-thalassemia major in Turkey, were
reported in 1941 (reviewed in Aksoy, 1991). However, the importance of b-thalassemia as a
health problem was brought to the attention of physicians only after 1950 (Aksoy, 1959).
Common problems encountered in Turkish b-thalassemia major patients included:
below-average height, growth retardation (mainly in patients of 10 years of age or more),
delay in bone age, and delayed puberty (Yesilipek et al., 1993). These results showed that
growth and endocrine disturbances have significant negative effects in the quality of life
of thalassemic patients. The first report about the prevalence of b-thalassemia carriers
in Turkey was published in 1971 in which the incidence rate was stated to be 2 per cent
(Cavdar et al., 1971). Dincol et al. were the first investigators to indicate regional
differences in the prevalence rate of b-thalassemia trait in Turkey and to demonstrate the
presence of both b+- and b0-thalassemia genes in the country (Dincol et al., 1979).
Studies conducted in the years 1980 and 1995, confirmed this observation and noted a
frequency variability ranging between 3.4 (East Anatolia) and 11 per cent (Western Thrace
and Antalya; Aksoy et al., 1980; Aksoy et al., 1985; Kurkcuoglu et al., 1986; Bircan et
al., 1993; Kocak et al., 1995). Due to this relatively high incidence of b-thalassemia in
the Turkish population, the presence of patients co-inheriting b-thalassemia along with
another congenital disorder is not surprising. So far, there has been several reports
about the co-inheritance of b-thalassemia along with Immerslund-Grasbeck Syndrome (Sayli
et al., 1994), Fanconi anemia (Altay et al., 1996a), and familial Mediterranean fever
(Canatan D., unpublished observations). The co-inheritance of b-thalassemia and HbS, that
is usually expressed as a severe type of disease in Turkish patients (Altay et al., 1997),
cannot be neglected either (reviewed in Altay and Basak, 1995).
It was only in the year 1987 that the first study discussing the
molecular basis of b-thalassemia in the Turkish population was published (Akar et al.,
1987). Progress in the methodology to analyze mutations of the b-globin gene has made it
possible to understand some of the mechanisms that are responsible for the occurrence of
b-thalassemia in Turkey. Since then, several country-scale studies have been conducted in
order to elucidate the molecular basis of b-thalassemia (Diaz-Chico et al., 1988; Gurgey
et al., 1989; Aulehla-Scholz et al., 1990; Oner et al., 1990; Basak et al., 1992a; Atalay,
et al., 1993; Altay and Basak, 1995; Nisli et al., 1997; Tadmouri et al., 1998a). These
studies showed that the molecular basis of b-thalassemia in Turkey is quite heterogeneous
and that more than 30 different mutations are behind the great variability in clinical
expression of this disorder. In addition to these studies, many reports of single cases of
Turkish b-thalassemia patients, either living in Turkey or abroad, contributed to the
wealth of information about the presence of many rare and several novel b-globin mutations
responsible for the disease in the Turkish population (Diaz-Chico et al., 1987;
Gonzalez-Redondo et al., 1989a; Gonzalez-Redondo et al., 1989b; Schnee et al., 1989; Oner
et al., 1991; Basak et al., 1992b; Ozcelik et al., 1993; Basak et al., 1993; Jankovic et
al., 1994; Tadmouri et al., 1997; Tuzmen et al., 1997; Tadmouri et al., 1998b; Tadmouri et
al., 1998c; Tadmouri et al., 1998d). Furthermore, several other papers described
non-common forms of molecular alterations leading to b-thalassemia such as a
deletion/inversion rearrangement of the b-globin gene cluster in a Turkish family with
db0-thalassemia intermedia (Kulozik, et al., 1992; Oner et al., 1997) and a new type of
b-thalassemia major with homozygosity for two non-consecutive 7.6 Kb deletions of the yb
and b-genes (Oner et al., 1995). By April 1998, the total number of b-thalassemia alleles
described in the Turkish population was 43 (Table 1) and they can surely be considered as
a testimony of past colonizations that inhabited the Anatolian lands.
Of the 43 b-thalassemia
mutations present in the Turkish population, at least 25 have been described in our
laboratory (Tadmouri et al., 1998a). The experimental strategy that was followed while
investigating the occurrence of these mutations was based on PCR amplification of the b-globin gene followed by dot-blot hybridization with 18 probes
specific for the Mediterranean populations. Denaturing gradient gel electrophoresis
(DGGE), restriction endonuclease analysis, and the amplification refractory mutation
system (ARMS) were also used. DNA samples, in which a mutation was not revealed by these
methods, were subjected to genomic sequencing (Tadmouri et al., 1998a).
Our results show that the IVS-I-110
(G-A) mutation is the most common b-thalassemia defect in
Turkey (39.3%), followed in decreasing order by IVS-I-6 (T-C), FSC-8 (-AA), IVS-I-1 (G-A),
IVS-II-745 (C-G), IVS-II-1 (G-A), Cd 39 (C-T), -30 (T-A), and FSC-5 (-CT) lesions, all of
which have frequencies above 2% (Tadmouri et al., 1998a).
Table 1. b-Globin Gene
Mutations Described in Turks
Mutation |
Reference |
-101 (C-T) |
Gonzalez-Redondo et al.,
1989b |
-87 (C-G) |
Diaz-Chico et al.,
1988 |
-30 (T-A) |
Oner et al., 1990 |
-28 (A-C) |
Oner et al., 1990 |
5’-UTR +22 (G-A) |
Oner et al., 1991 |
FSC-5 (-CT) |
Oner et al., 1990 |
FSC-6 (-A) |
Oner et al., 1990 |
FSC-8 (-AA) |
Diaz-Chico et al.,
1988 |
FSC-8/9 (+G) |
Oner et al., 1990 |
Cd 15 (G-A) |
Aulehla-Scholz et al.,
1990 |
FSC 22/23/24 (-AAGTTGG) |
Ozcelik et al.,
1993 |
Cd 26 (G-A) HbE |
Altay and Basak,
1995 |
Cd 27 (G-T) Hb Knossos |
Gurgey et al., 1989 |
Cd 30 (G-C) |
Jankovic et al.,
1994 |
IVS-I-1 (G-A) |
Diaz-Chico et al.,
1988 |
IVS-I-1 (G-C) |
Altay and Basak,
1995 |
IVS-I-1 (G-T) |
Altay and Basak,
1995 |
IVS-I-5 (G-A) |
Oner et al., 1990 |
IVS-I-5 (G-C) |
Diaz-Chico et al.,
1988 |
IVS-I-5 (G-T) |
Oner et al., 1990 |
IVS-I-6 (T-C) |
Diaz-Chico et al.,
1988 |
IVS-I-110 (G-A) |
Diaz-Chico et al.,
1988 |
IVS-I-116 (T-G) |
Basak et al., 1992a |
IVS-I-130 (G-A) |
Tadmouri et al.,
1998c |
IVS-I-130 (G-C) |
Oner et al., 1990 |
FSC-36/37 (-T) |
Jankovic et al.,
1994 |
Cd 37 (G-A) |
Altay and Basak,
1995 |
FSC 37-39 (-7 bp) |
Schnee et al., 1989 |
Cd 39 (C-T) |
Diaz-Chico et al.,
1988 |
FSC-44 (-C) |
Altay and Basak,
1995 |
FSC-74/75 (-C) |
Basak et al., 1992b |
IVS-II-1 (G-A) |
Diaz-Chico et al.,
1988 |
IVS-II-654 (C-T) |
Tadmouri et al.,
1998d |
IVS-II-745 (C-G) |
Diaz-Chico et al.,
1988 |
IVS-II-848 (C-A) |
Altay and Basak,
1995 |
3'-UTR +1,565 to +1,577 (-13 bp) |
Basak et al., 1993 |
Poly A (AATAAA-AATAAG) |
Altay and Basak,
1995 |
Poly A (AATAAA-AATGAA) |
Tadmouri et al.,
1998a |
290 bp deletion |
Diaz-Chico et al.,
1987 |
HbD Los Angeles |
Tadmouri et al.,
1998a |
HbE Saskatoon |
Tadmouri et al.,
1998a |
HbS |
Egeli and Ergun,
1946 |
db-Thalassemia
|
Tadmouri et al.,
1998a |
A comparison of the mutation
frequencies in different regions of Turkey demonstrates that the distribution of b-thalassemia alleles differs within each area with marked local
variations. When the regional results are compared with the overall frequency prevalent in
the country, it can be noticed that the western and southern parts of Turkey are in good
accordance with the overall distribution, whereas the northern and eastern parts have a
more region/population-specific profile. The ethnic identities of the latter regions seem
to be more preserved than the western and southern coastal parts of the country, which
display a greater heterogeneity. On the other hand, although less heterogeneous, the
northern, eastern and southeastern parts of Turkey seem to have their own battery of
mutations, e.g. -30 (T-A), -87 (C-G), FSC-8/9 (+G) and IVS-II-745 (C-G) have a
significantly high occurrence in these regions (Tadmouri et al., 1998a).
Although there are excellent
treatment modalities today, like hypertransfusion therapy and administration of iron
chelating agents for control of the accumulated excess iron, there is no definitive cure
for b-thalassemia yet. Drugs to enhance the g-globin gene
expression, bone marrow transplantation and gene therapy seem to be very promising,
however, they are not in routine use yet. Thus, emphasis has to be given to prevention
programs, like carrier screening and prenatal diagnosis.
Advances in the molecular
understanding of b-thalassemia in Turkey did greatly improve
preventive medical services such as genetic counseling and prenatal diagnosis and shed
light on understanding the clinical and hematological variations of this disorder. For
this, specialized medical centers at different universities were established to conduct
treatment and investigation of b-thalassemic patients. Despite
the difficulties imposed by the presence of various kinds of mutations leading to b-thalassemia in Turkey, prenatal diagnosis is feasible when early
methods of fetal sampling are combined with the advent of PCR-based techniques such as,
allele specific oligonucleotide hybridization, the amplification refractory mutation
system, restriction endonuclease digestion analysis, DNA sequencing (Tuzmen et al., 1996),
and, more recently, the reverse dot-blot hybridization technique. At present, prenatal
diagnosis of b-thalassemia and sickle cell disease (SCD) are
performed in several centers in Turkey, some of which are, Hacettepe University (Ankara;
Gurgey et al., 1996), Bogazici University (Istanbul), and Cukorova University (Adana;
reviewed by Altay and Basak, 1995).
During the years 1990-1998 (April),
94 pregnancies at risk for b-thalassemia and SCD have been
successfully completed in the framework of a prenatal diagnosis program conducted in our
laboratory. Until 1995, molecular screening was carried out using the methods mentioned
previously. In 1996, the reverse dot-blot method was introduced (b-Globin
StripAssay Kit, Vienna Labs). This method, which is capable of handling in a
non-radioactive format the screening of a single sample for many mutation sites, is rapid,
accurate, reliable, and cost-effective.
In addition to the elevated rate of
consanguineous marriages (21%) within certain communities having a high incidence of
thalassemia (Basaran et al., 1988), Turkey is one of the countries showing the highest
rates of population increase in the world (36:1000, Census 1994). Both figures appear to
contribute drastically to the frequency of affected births. The expected number of infants
born annually with b-thalassemia and SCD in Turkey has been
calculated to be around 150 and 40, respectively. Hence, approximately 800 pregnant women
should seek prenatal diagnosis each year. Unfortunately, the total number of prenatal
diagnoses performed in all operating centers barely exceeds 1/8th of the
expected value each year (reviewed by Altay and Basak, 1995). This indicates the need for
implementing a comprehensive genetic preventive program for the eradication of b-thalassemia and SCD in Turkey like those going on in many
Mediterranean countries. This could be performed either by screening of reproductive
couples when they register for marriage (Altay et al., 1996b) or by educating the
population at risk and their physicians. Intensive involvement of the population, e.g.,
community education and informed genetic counseling, is an important prerequisite (Tuzmen
et al., 1996).
By far the most common readily
detectable type of variation between individuals in the globin loci is produced by neutral
DNA sequence differences named ‘polymorphisms’. Such polymorphisms are estimated to
occur every hundred bases or so throughout the genome (Jeffreys, 1979), representing a
huge reservoir of genetic variation. Many polymorphisms have been found in the b-globin gene cluster (reviewed by Labie and Elion, 1996). Given the
considerable number of such polymorphisms found in the b-globin
cluster, it may be calculated that, potentially, a very large number of combinations of
these sites along a chromosome, i.e., ‘haplotypes’, might exist. DNA haplotypes in the
b-globin gene can be used for a) the discrimination between
diverse epistatic events linked to the b-gene that may modulate
the phenotypic expression of a structural mutation and b) the determination of the date of
origin and track of gene flow of a particular b-globin gene
mutation (reviewed by Labie and Elion, 1996).
Recently, DNA sequence variation in the intergenic
domain upstream to the b-globin gene has attracted an increased
attention. A large group of studies have accumulated in the last few years, most of which
aimed at deducing the possible origins of some b-globin gene
mutations through the analysis of several nucleotide polymorphisms and the (AT)xTy
motif 5’ to the b-globin gene (reviewed by Labie and Elion,
1996). In a yet unpublished study of Trabuchet et al. (UCBLI, France), conducted over 3000
subjects living in a remote village in Senegal with a history of consanguineous marriages
(90%), over 36 different b-globin haplotypes were
characterized. This demonstrates two main facts:
- The populations in Africa today are recognized as the most diverse,
irrespective of the level of genetic analyses.
- This result also shows the relative variability in the studied
polymorphic region, making it one of the most ideal tools to study relationships between
different populations.
In order to deduce the possible
origins for the different b-thalassemia mutations in Turkey, we
are, presently, analyzing a 790 bp DNA fragment located 400 bp 5’ to the b-globin gene that contains nine polymorphic nucleotides (-1069,
-989, -780, -710, -703, -551, -543, -521, -491) and one hypervariable microsatellite of
composite sequence (AT)xTy.
By comparing our preliminary results
concerning the spectrum of the b-globin gene haplotypes in
Turkey (Table I) with those, of Perrin et al. in Algeria (1998) some conclusions may be
reached:
- The IVS-I-110 mutation is associated in Turkey with two distinct
haplotypes ACATTTCCA (AT)7T7 (haplotype I) and GCATTTCCA (AT)7T7 (haplotype R). In
Algeria, where haplotype R was not found at all (Perrin et al., 1998), a third haplotype
is present [ACATCCCCA (AT)9T5 (haplotype V)]. Although these results may suggest that
IVS-I-110 has multiple origins, we propose that the mutation originally occurred on
haplotype I (predominating in IVS-I-110 alleles from both countries) and the observed
haplotypic diversity is mainly due to recombination events between the ancestral b-thalassemia chromosome and other chromosomes, such as haplotype R
that seems to be common in normal alleles from Turkey. The haplotype I encountered in
Algeria agrees well with an Ottoman importation, between the 16th and 19th
centuries, thus favoring an East Mediterranean origin for IVS-I-110.
- Some other mutations, e.g., -87 (C-G) and IVS-I-130 (G-A), had more
specific associations with unique haplotypes indicating differences in their origins in
respect to time and place. As for the IVS-I-130 (G-A), we found that this rare mutation is
associated with either haplotypes GCTTCC(AT)7T7CA or GCTCCC(AT)7T7CA.
The first of these haplotypes has been observed in Algerian b-thalassemia
chromosomes carrying the -29 (A-G) and the FSC-6 (-A) alleles encountered in high
frequencies in this country (Perrin et al., 1998). The second sequence haplotype, however,
seems to be strictly associated with the Algerian IVS-I-2 (T-C) mutation (Perrin et al.,
1998). In conjunction with this, the fact that the mutation IVS-I-130 (G-A) was described
once in an Egyptian patient (Deidda et al., 1990) could be a good indication favoring a
North-Eastern African origin, and then we would expect to find a similar sequence
haplotype in the Egyptian patient. Confirmation would need a deep screening of thalassemic
mutations in countries like Egypt or Libya (Tadmouri et al., 1998c).
- Another interesting observation is the association of the ‘Chinese’
IVS-II-654 (T-C) mutation, we encountered in a Turkish family, with the (AT)9(T)5
type of microsatellite and the ACATCCCCA sequence. Chinese IVS-II-654 chromosomes,
however, are strongly linked to the (AT)8(T)5 type of arrangement
(Zhou et al., 1995). To the best of our knowledge, the ACATCCCCA (AT)9(T)5
compound motif was thus far described in only three IVS-I-110 (G-A) b-thalassemia
patients from the Oran region (Algeria; Perrin et al., 1998), in one Cd 39 (C-T)
heterozygote from Western Thrace, as well as in several normal b-globin
genes from France (Perrin P., personal communication, Jan. 1998). This line of evidence
strongly suggests a Western Mediterranean, thus, an independent origin for the IVS-II-654
(C-T) mutation occurring in our family (Tadmouri et al., 1998d).
The example of mutation/haplotype association of b-globin alleles shows the complexities that must be entertained when
we try to deduce reasons for the presence of a genetic disease from the haplotype and gene
frequency data derived from large numbers of different populations. For this, the
molecular data should be combined with the archeological and historical records to confirm
the origin of descent of different mutations.
Future Aspects
The battery of b-thalassemia mutations occurring in Turkey have been investigated to
almost completeness in the last decade. Today, we know that these mutations affect
different levels of b-globin gene expression, thus, giving rise
to the high phenotypic variation observed in b-thalassemia
patients. Understanding the regulation and expression mechanisms operating in the b-globin gene will surely have a great impact on the management of
this common hemoglobinopathy in the age of ‘Molecular Medicine’. This should define
the present direction of thalassemia research in Turkey.
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