This file was created with JabRef 2.0.1. Encoding: UTF8 @CONFERENCE{A.2002, author = {A. Eid, S. Rashad and A. Farag,}, title = {A General Purpose Platform for 3D Reconstruction from Sequence of Images}, booktitle = {Proceedings of 5th International Conference on Information Fusion, Annapolis, MD, Vol. 1, pp. 425-413, July 2002.}, year = {2002}, abstract = {A number of approaches have been proposed in the literature for reconstruction of 3-D objects from sequence of images. Yet, very few studies have been reported on the quantification/validation of the accuracy of these reconstructions. In addition, no design has been reported for a generic vision platform that can allow various modality imaging. The purpose of this paper is two folds: 1) propose a vision platform that lend itself for acquisition of calibrated sequence of images, and concurrently obtain a direct 3-D reconstruction by laser scanning; and 2) develop and implement different approaches for 3-D reconstructions from sequence of images. 3-D reconstructions will be evaluated against the 3-D scanning generated from a laser scanner. Validation of the reconstructions is made by pairwise comparison with the 3-D scanning results. Preliminary studies with the proposed vision platform show a good promise for its use in the validation of various 3-D reconstructions, registration and data fusion.}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Abate2005, author = {Abate, A.F.; Nappi, M.; Ricciardi, S.; Sabatino, G.;}, title = {Fast 3D face recognition based on normal map}, booktitle = {Image Processing, 2005. ICIP 2005. IEEE International Conference on volume 2, 11-14 Sept. 2005 Page(s):II - 946-9}, year = {2005}, abstract = {This paper presents a 3D face recognition method aimed to biometric applications. The proposed method compares any two faces represented as 3D polygonal surfaces through their corresponding normal map, a bidimensional array which stores local curvature (mesh normals) as the pixel's RGB components of a color image. The recognition approach, based on the computation of a difference map resulting from the comparison of normal maps, is simple yet fast and accurate. A weighting mask, automatically generated for each subject using a set of expression variations, improves the robustness to a broad range of facial expressions. First results show the effectiveness of the method on a database of 3D faces featuring different genders, ages and expressions.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Agarwal2006, author = {Agarwal, A.; Triggs, B.;}, title = {Recovering 3D human pose from monocular images}, journal = {Pattern Analysis and Machine Intelligence, IEEE Transactions}, year = {2006}, volume = {28}, pages = {44 - 58}, abstract = {We describe a learning-based method for recovering 3D human body pose from single images and monocular image sequences. Our approach requires neither an explicit body model nor prior labeling of body parts in the image. Instead, it recovers pose by direct nonlinear regression against shape descriptor vectors extracted automatically from image silhouettes. For robustness against local silhouette segmentation errors, silhouette shape is encoded by histogram-of-shape-contexts descriptors. We evaluate several different regression methods: ridge regression, Relevance Vector Machine (RVM) regression, and Support Vector Machine (SVM) regression over both linear and kernel bases. The RVMs provide much sparser regressors without compromising performance, and kernel bases give a small but worthwhile improvement in performance. The loss of depth and limb labeling information often makes the recovery of 3D pose from single silhouettes ambiguous. To handle this, the method is embedded in a novel regressive tracking framework, using dynamics from the previous state estimate together with a learned regression value to disambiguate the pose. We show that the resulting system tracks long sequences stably. For realism and good generalization over a wide range of viewpoints, we train the regressors on images resynthesized from real human motion capture data. The method is demonstrated for several representations of full body pose, both quantitatively on independent but similar test data and qualitatively on real image sequences. Mean angular errors of 4{\hbox{-}}6^\circ are obtained for a variety of walking motions.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Aldur2005, author = {Muhammet M Aldur}, title = {{C}reating computer aided 3{D} model of spleen and kidney based on {V}isible {H}uman {P}roject.}, journal = {Saudi Med J}, year = {2005}, volume = {26}, pages = {51--56}, number = {1}, month = {Jan}, abstract = {OBJECTIVE: To investigate the efficacy of computer aided 3-dimensional (3D) reconstruction technique on visualization and modeling of gross anatomical structures with an affordable methodology applied on the spleen and kidney. METHODS: From The Visible Human Project Dataset cryosection images, developed by the National Library of Medicine, the spleen and kidney sections were preferred to be used due to their highly distinct contours. The software used for the reconstruction were SurfDriver 3.5.3 for Mac and Cinema 4D XL version 7.1 for Mac OS X. This study was carried out in May 2004 at the Department of Anatomy, Hacettepe University, Ankara, Turkey. RESULTS: As a result of this study, it is determined that these 2 programs could be effectively used both for 3D modeling of the mentioned organs and volumetric analyses on these models. It is also seen that it is possible to hold the physical models of these gross anatomical digital ones with stereolithography technique by means of the data exchange file format provided by the program and present such images as anaglyph. CONCLUSION: SurfDriver 3.5.3 for Mac OS and Cinema 4 DXL version 7.1 for Mac OS X can be used effectively for reconstruction of gross anatomical structures from serial parallel sections with distinct contours such as spleen and kidney and the animation of models. These software constitute a highly effective way of getting volumetric calculations, spatial relations and morphometrical measurements of reconstructed structures.}, keywords = {Bacteriophage mu, Computer Simulation, DNA Transposable Elements, Electron, Energy-Filtering Transmission Electron, Humans, Imaging, Kidney, Microscopy, Non-U.S. Gov't, Protein Structure, Research Support, Scanning Transmission, Spleen, Tertiary, Three-Dimensional, Transposases, Visible Human Project, 15756353}, owner = {Administrator}, pii = {'}, pmid = {15756353}, timestamp = {2006.04.20}, } @ARTICLE{Alessio2006, author = {Adam Alessio and Ken Sauer and Paul Kinahan}, title = {{A}nalytical reconstruction of deconvolved {F}ourier rebinned {PET} sinograms.}, journal = {Phys Med Biol}, year = {2006}, volume = {51}, pages = {77--93}, number = {1}, month = {Jan}, abstract = {Fully 3D PET data are often rebinned into 2D data sets in order to avoid computationally intensive fully 3D reconstruction. Then, conventional 2D reconstruction techniques are employed to obtain images from the rebinned data. In a common scenario, 2D filtered back projection (FBP) is applied to Fourier rebinned (FORE) data. This approach is suboptimal because FBP is based on an idealized mathematical model of the data and cannot account for the statistical structure of data and noise. FORE data contain some blur in all three dimensions in comparison to conventional 2D PET data. In this work, we propose methods for approximating this blur in the sinogram domain due to FORE through its point spread function (PSF). We also explore simple methods for deconvolving the rebinned data with this PSF to restore it to a more ideal state prior to FBP. Our results show that deconvolution of the approximate transaxial PSF yields no improvement. When low image noise levels are required for detection tasks, the deconvolution of the axial PSF does not provide adequate resolution or quantitative benefits to justify its application. When accurate quantitation is required and higher noise levels are acceptable, the deconvolution of the axial PSF leads to considerable gains (30\%) in accuracy over conventional FORE+FBP at matched noise levels.}, doi = {10.1088/0031-9155/51/1/006}, keywords = {Adenosine, Adult, Algorithms, Anatomic, Animals, Blood Volume, Clitoris, Comparative Study, Computer Simulation, Computer-Aided Design, Computer-Assisted, Connective Tissue, Contrast Media, Coronary Circulation, Coronary Stenosis, Echocardiography, Extramural, Female, Finite Element Analysis, Fluorocarbons, Histamine H1 Antagonists, Humans, Hyaenidae, Image Processing, Imaging, In Vitro, Loratadine, Male, Mice, Models, Movement, N.I.H., Non-P.H.S., Non-Sedating, Non-U.S. Gov't, Penis, Phantoms, Programming Languages, Rabbits, Radiotherapy Planning, Research Support, Respiration, Robotics, Software, Subtraction Technique, Swine, Three-Dimensi, Three-Dimensional, Tomography, U.S. Gov't, Urogenital Surgical Procedures, User-Computer Interface, Ventricular Pressure, Video-Assisted Surgery, X-Ray Computed, onal, 16357432}, owner = {Administrator}, pii = {S0031-9155(06)96838-9}, pmid = {16357432}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1088/0031-9155/51/1/006}, } @ARTICLE{Andrey2005, author = {Philippe Andrey and Yves Maurin}, title = {{F}ree-{D}: an integrated environment for three-dimensional reconstruction from serial sections.}, journal = {J Neurosci Methods}, year = {2005}, volume = {145}, pages = {233--244}, number = {1-2}, month = {Jun}, abstract = {Three-dimensional (3D) reconstruction is a powerful tool to investigate complex neuroanatomical organizations. 3D models are often generated by piling up registered segmentations carried out on serial sections labeled by histological means. However, these models suffer limitations (incompleteness and lack of statistical representativity), which can be overcome by model averaging and fusion. These operations require an appropriate reconstruction environment allowing the simultaneous processing of several data sets. This paper describes the first release of Free-D, a software designed for the reconstruction of 3D models generated from stacks of serial sections, in the perspective of model averaging and fusion. A unique graphical user interface integrates the 3D reconstruction tools. Several large stacks (tens of gigabytes) including hundreds of images having heterogeneous characteristics (size, resolution, depth, etc.) can be simultaneously processed, thus complying to most encountered experimental situations. This first version of Free-D constitutes the required environment for the future integration of the averaging and fusion algorithms currently developed in our group and illustrated here with preliminary results.}, doi = {10.1016/j.jneumeth.2005.01.006}, keywords = {Algorithms, Animals, Artificial Intelligence, Biological, Cadaver, Ce, Cell Survival, Cochlear Implants, Coin Lesion, Computer Graphics, Computer Simulation, Computer-Assisted, Female, Hearing Loss, Humans, Image Processing, Imaging, Male, Models, Neurons, Non-U.S. Gov't, Programming Languages, Pulmonary, Radiographic Image Enhancement, Radiographic Image Interpretation, Rats, Research Support, Software, Spinal Cord, Spiral Ganglion, Surgery, Temporal Bone, Three-Dimensional, User-Computer Interface, ll Count, 15922039}, owner = {Administrator}, pii = {S0165-0270(05)00016-6}, pmid = {15922039}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1016/j.jneumeth.2005.01.006}, } @CONFERENCE{Avanaki2004, author = {Avanaki, A.N.; Hamidzadeh, B.; Kossentini, F.; Ward, R.;}, title = {Multi-reference object pose indexing and 3-D modeling from video using volume feedback}, booktitle = {Circuits and Systems, 2004. ISCAS '04. Proceedings of the 2004 International Symposium on Volume 3, 23-26 May 2004 Page(s):III-893 - III-896 Vol.3}, year = {2004}, abstract = {A system for 3-D reconstruction of a rigid object from monocular video sequences is introduced. Initially an object pose is estimated in each image by locating similar (unknown) texture assuming flat depth map for all images. Shape-from-silhouette as stated in R. Szeliski (1993) is then applied to construct a 3-D model which is used to obtain better pose estimates using a model-based method. Before repeating the process by building a new 3-D model, pose estimates are adjusted to reduce error by maximizing a quality measure for shape-from-silhouette volume reconstruction. Translation of the object in the input sequence is compensated in two stages. The volume feedback is terminated when the updates in pose estimates become small. The final output is a pose index (the last set of pose estimates) and a 3-D model of the object. Good performance of the system is shown by experiments on a real video sequence of a human head. Our method has the following advantages: (1) No model is assumed for the object. (2) Feature points are neither detected nor tracked, thus no problematic feature matching or lengthy point tracking are required. (3) The method generates a high level pose index for the input images, these can be used for content-based retrieval. Our method can also be applied to 3-D object tracking in video.}, journal = {. Multi-reference object pose indexing and 3-D modeling from video using volume feedback Avanaki, A.N.; Hamidzadeh, B.; Kossentini, F.; Ward, R.; Circuits and Systems, 2004. ISCAS '04. Proceedings of the 2004 International Symposium on Volume 3, 23-26 May 2004 Page(s):III-893 - III-896 Vol.3 Digital Object Identifier 10.1109/ISCAS.2004.1328891}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Baback2003, author = {Baback Moghaddam, Jinho Lee, Hanspeter Pfister, Raghu Machiraju,}, title = {Model-Based 3D Face Capture with Shape-from-Silhouettes}, booktitle = {IEEE International Workshop on Analysis and Modeling of Faces and Gestures}, year = {2003}, abstract = {We present a method for 3D face acquisition using a set or sequence of 2D binary silhouettes. Since silhouette images depend only on the shape and pose of an object, they are immune to lighting and/or texture variations (unlike feature or texture-based shape-from-correspondence). Our prior 3D face model is a linear combination of "eigenheads" obtained by applying PCA to a training set of laser-scanned 3D faces. These shape coefficients are the parameters for a near-automatic system for capturing the 3D shape as well as the 2D texture-map of a novel input face. Specifically, we use back-projection and a boundary-weighted XOR-based cost function for binary silhouette matching, coupled with a probabilistic "downhill-simplex" optimization for shape estimation and refinement. Experiments with a multicamera rig as well as monocular video sequences demonstrate the advantages of our 3D modeling framework and ultimately, its utility for robust face recognition with built-in invariance to pose and illumination.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Barros2006, author = {Ricardo Machado Leite de Barros and Tiago Guedes Russomanno and René Brenzikofer and Pascual Jovino Figueroa}, title = {{A} method to synchronise video cameras using the audio band.}, journal = {J Biomech}, year = {2006}, volume = {39}, pages = {776--780}, number = {4}, abstract = {This paper proposes and evaluates a novel method for synchronisation of video cameras using the audio band. The method consists in generating and transmitting an audio signal through radio frequency for receivers connected to the microphone input of the cameras and inserting the signal in the audio band. In a software environment, the phase differences among the video signals are calculated and used to interpolate the synchronous 2D projections of the trajectories. The validation of the method was based on: (1) Analysis of the phase difference changes as a function of time of two video signals. (2) Comparison between the values measured with an oscilloscope and by the proposed method. (3) Estimation of the improvement in the accuracy in the measurements of the distance between two markers mounted on a rigid body during movement applying the method. The results showed that the phase difference changes in time slowly (0.150 ms/min) and linearly, even when the same model of cameras are used. The values measured by the proposed method and by oscilloscope showed equivalence (R2=0.998), the root mean square of the difference between the measurements was 0.10 ms and the maximum difference found was 0.31 ms. Applying the new method, the accuracy of the 3D reconstruction had a statistically significant improvement. The accuracy, simplicity and wide applicability of the proposed method constitute the main contributions of this work.}, doi = {10.1016/j.jbiomech.2004.12.025}, keywords = {Algorithms, Amino Acid Substitution, Anatomic, Bacteriophage P22, Biophysics, Capsid, Capsid Proteins, Cardiac Surgical Procedures, Cardiovascular, Comparative Study, Computer Simulation, Coronary Angiography, Cross-Linking Reagents, Cysteine, Extramural, Humans, Mass, Minimally Invasive, Models, Molecu, N.I.H., Non-U.S. Gov't, Protein Binding, Protein Subunits, Research Support, Spectrum Analysis, Surgical Procedures, Threonine, Virus Assembly, lar, 16439248}, owner = {Administrator}, pii = {S0021-9290(05)00040-0}, pmid = {16439248}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1016/j.jbiomech.2004.12.025}, } @ARTICLE{Bazin2005, author = {Pierre-Louis Bazin and Jean-Marc Vézien}, title = {{I}ntegration of geometric elements, {E}uclidean relations, and motion curves for parametric shape and motion estimation.}, journal = {IEEE Trans Pattern Anal Mach Intell}, year = {2005}, volume = {27}, pages = {1960--1976}, number = {12}, month = {Dec}, abstract = {This paper presents an approach to shape and motion estimation that integrates heterogeneous knowledge into a unique model-based framework. We describe the observed scenes in terms of structured geometric elements (points, line segments, rectangles, 3D corners) sharing explicitly Euclidean relationships (orthogonality, parallelism, colinearity, coplanarity). Camera trajectories are represented with adaptative models which account for the regularity of usual camera motions. Two different strategies of automatic model building lead us to reduced models for shape and motion estimation with a minimal number of parameters. These models increase the robustness to noise and occlusions, improve the reconstruction, and provide a high-level representation of the observed scene. The parameters are optimally computed within a sequential Bayesian estimation procedure that gives accurate and reliable results on synthetic and real video imagery.}, keywords = {Adenosine, Adult, Algorithms, Anatomic, Animals, Artificial Intelligence, Automated, Blood Volume, Clitoris, Comparative Study, Computer Simulation, Computer-Aided Design, Computer-Assisted, Connective Tissue, Contrast Media, Coronary Circulation, Coronary Stenosis, Echocardiography, Extramural, Female, Finite Element Analysis, Fluorocarbons, Histamine H1 Antagonists, Humans, Hyaenidae, Image Enhancement, Image Interpretation, Image Processing, Imaging, In Vitro, Information Storage and Retrieval, Loratadine, Male, Mice, Models, Motion, Movement, N.I.H., Non-P.H.S., Non-Sedating, Non-U.S. Gov't, Pattern Recognition, Penis, Phantoms, Programming Languages, Rabbits, Radiotherapy Planning, Research Support, Respiration, Robotics, Software, Statistical, Subtraction Technique, Swine, Three-Dimensi, Three-Dimensional, Tomography, U.S. Gov't, Urogenital Surgical Procedures, User-Computer Interface, Ventricular Pressure, Video-Assisted Surgery, X-Ray Computed, onal, 16355662}, owner = {Administrator}, pmid = {16355662}, timestamp = {2006.04.20}, } @ARTICLE{Behr2006, author = {Michel Behr and Lionel Thollon and Pierre-Jean Arnoux and Thierry Serre and Stéphane Berdah and Patrick Baque and Christian Brunet}, title = {3{D} reconstruction of the diaphragm for virtual traumatology.}, journal = {Surg Radiol Anat}, year = {2006}, pages = {1--6}, month = {Feb}, abstract = {This study lies within the scope of passive road safety, and more particularly injury mechanisms of the abdominal area. The finite element modeling, which makes it possible to simulate a road accident and to observe the possible bone fractures or internal tissue injuries, allows large projections in the comprehension of injury mechanisms. However, the digital models already available and used in accidentology do not offer as one very simplified description of the diaphragm, as well for its geometry as for its bracing aspect and the modifications that this could induce in the behavior of abdominal organs and vessels at impact. In order to develop an accurate model of diaphragm for road safety research, a 3D reconstruction was performed, based on a sitting post-mortem Human subject sections. The resulting geometry was then turned into a segmented mechanical component (using the finite element method) and included in a full human model already available. The result is a valuable tool to improve the knowledge of injury mechanisms involved in car crashes at the abdominal level.}, doi = {10.1007/s00276-006-0080-5}, keywords = {Algorithms, Anatomic, Biophysics, Cardiac Surgical Procedures, Cardiovascular, Comparative Study, Computer Simulation, Coronary Angiography, Humans, Minimally Invasive, Models, Non-U.S. Gov't, Research Support, Surgical Procedures, 16470342}, owner = {Administrator}, pmid = {16470342}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1007/s00276-006-0080-5}, } @CONFERENCE{Beraldin2002, author = {Beraldin, J.-A.; Guidi, G.; Ciofi, S.; Atzeni, C.;}, title = {Improvement of metric accuracy of digital 3D models through digital photogrammetry. A case study: Donatello's Maddalena}, booktitle = {3D Data Processing Visualization and Transmission, 2002. Proceedings. First International Symposium on19-21 June 2002 Page(s):758 - 761}, year = {2002}, abstract = {In spite of an undoubted richness of information produced by 3D optical technologies, in some cases, the method for generating a digital model from single 3D acquisitions involves the propagation of errors. These errors limit the overall metric accuracy attainable with such procedure. This happens when small 3D images are assembled together in order to model a large object. The authors present a procedure by which the metric reliability of the 3D model, obtained through iterative alignments of single range maps, can be guaranteed to an acceptable level. For this purpose, non-impeding optical targets were specifically designed for placement around the object. These are measured using a close range digital photogrammetry technique and by the 3D range camera system. From these measurements, transformation matrices have been calculated. Each matrix allows for the roto-translation (pose) of the 3D images from the local coordinate system of the range camera to an accurate global coordinate system determined by the digital photogrammetric procedure.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Bjaalie2006, author = {Jan G Bjaalie and Trygve B Leergaard and Christian Pettersen}, title = {{M}icro3{D}: computer program for three-dimensional reconstruction visualization, and analysis of neuronal populations and barin regions.}, journal = {Int J Neurosci}, year = {2006}, volume = {116}, pages = {515--540}, number = {4}, month = {Apr}, abstract = {This article presents a computer program, Micro3D, designed for 3-D reconstruction, visualization, and analysis of coordinate-data (points and lines) recorded from serial sections. The software has primarily been used for studying shapes and dimension of brain regions (contour line data) and distributions of cellular elements such as neuronal cell bodies or axonal terminal fields labeled with tract-tracing techniques (point data). The tissue elements recorded could equally well be labeled with use of other techniques, the only requirement being that the data collected are saved as x,y,z coordinates. Data are typically imported from image-combining computerized microscopy systems or image analysis systems, such as Neurolucida (MicroBrightField, Colchester, VT) or analySIS (Soft Imaging System, Gmbh, Münster, Germany). System requirements are a PC running LINUX. Reconstructions in Micro3D may be rotated and zoomed in real-time, and submitted to perspective viewing and stereo-imaging. Surfaces are re-synthesized on the basis of stacks of contour lines. Clipping is used for defining section-independent subdivisions of the reconstruction. Flattening of curved sheets of points layers (e.g., neurons in a layer) facilitates inspection of complicated distribution patterns. Micro3D computes color-coded density maps. Opportunities for translation of data from different reconstructions into common coordinate systems are also provided. This article demonstrates the use of Micro3D for visualization of complex neuronal distribution patterns in somatosensory and auditory systems. The software is available for download on conditions posted at the NeSys home pages (http://www.nesys.uio.no/) and at The Rodent Brain Workbench (http://www.rbwb.org/).}, keywords = {16596747}, owner = {Administrator}, pmid = {16596747}, timestamp = {2006.04.20}, } @ARTICLE{Canero2002, author = {Canero, C.; Vilarino, F.; Mauri, J.; Radeva, P.;}, title = {Predictive (un)distortion model and 3-D reconstruction by biplane snakes}, journal = {Medical Imaging, IEEE Transactions}, year = {2002}, volume = {21}, pages = {1188 - 1201}, abstract = {This paper is concerned with the 3D reconstruction of coronary vessel centerlines and with how distortion of X-ray angiographic images affects it. Angiographies suffer from pincushion and other geometrical distortions, caused by the peripheral concavity of the Image Intensifier (II) and the non-linearity of electronic acquisition devices. In routine clinical practice, where a Field-Of-View (FOV) of 17-23 cm is commonly used for the acquisition of coronary vessels, this distortion introduces a positional error of up to 7 pixels for an image matrix size of512 x512 and a FOV of 17 cm. This error increases with the size of the FOV. Geometrical distortions have a significant effect on the validity of the 3D reconstruction of vessels from these images. We show how this effect can be reduced by integrating a predictive model of (un)distortion into the biplane snakes formulation for 3D reconstruction. First, we prove that the distortion can be accurately modeled using a polynomial for each view. Also, we show that the estimated polynomial is independent of focal length, but not of changes in anatomical angles, as the II is influenced by the earth’s magnetic field. Thus, we decompose the polynomial into two components, namely the steady and the orientation-dependent component. We determine the optimal polynomial degree for each component, which is empirically determined to be 5 for the steady component, and 3 for the orientation-dependent one. This fact simplifies the prediction of the orientation-dependent polynomial, since the number of polynomial coefficients to be predicted is lower. The integration of this model into the biplane snakes formulation enables us to avoid image unwarping, which deteriorates image quality and therefore complicates vessel centerline feature extraction. Moreover, we improve the biplane snake behavior when dealing with wavy vessels, by means of using Generalized Gradient Vector Flow (GGVF). Our experiments show that the proposed methods Flow (GGVF). Our experiments show that the proposed methods in this paper decrease up to 88% the reconstruction error obtained when geometrical distortion effects are ignored. Tests on imaged phantoms and real cardiac images are presented as well.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Castro-Pareja2003, author = {Castro-Pareja, C.R.; Jagadeesh, J.M.; Shekhar, R.;}, title = {FAIR: a hardware architecture for real-time 3-D image registration}, journal = {Information Technology in Biomedicine, IEEE Transactions}, year = {2003}, volume = {7}, pages = {426 - 434}, abstract = {Mutual information-based image registration, shown to be effective in registering a range of medical images, is a computationally expensive process, with a typical execution time on the order of minutes on a modern single-processor computer. Accelerated execution of this process promises to enhance efficiency and therefore promote routine use of image registration clinically. This paper presents details of a hardware architecture for real-time three-dimensional (3-D) image registration. Real-time performance can be achieved by setting up a network of processing units, each with three independent memory buses: one each for the two image memories and one for the mutual histogram memory. Memory access parallelization and pipelining, by design, allow each processing unit to be 25 times faster than a processor with the same bus speed, when calculating mutual information using partial volume interpolation. Our architecture provides superior per-processor performance at a lower cost compared to a parallel supercomputer.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Cerveri2005a, author = {P. Cerveri and N. Lopomo and A. Pedotti and G. Ferrigno}, title = {{D}erivation of centers and axes of rotation for wrist and fingers in a hand kinematic model: methods and reliability results.}, journal = {Ann Biomed Eng}, year = {2005}, volume = {33}, pages = {402--412}, number = {3}, month = {Mar}, abstract = {In the field of 3D reconstruction of human motion from video, model-based techniques have been proposed to increase the estimation accuracy and the degree of automation. The feasibility of this approach is strictly connected with the adopted biomechanical model. Particularly, the representation of the kinematic chain and the assessment of the corresponding parameters play a relevant role for the success of the motion assessment. In this paper, the focus is on the determination of the kinematic parameters of a general hand skeleton model using surface measurements. A novel method that integrates nonrigid sphere fitting and evolutionary optimization is proposed to estimate the centers and the functional axes of rotation of the skeletal joints. The reliability of the technique is tested using real movement data and simulated motions with known ground truth 3D measurement noise and different ranges of motion (RoM). With respect to standard nonrigid sphere fitting techniques, the proposed method performs 10-50\% better in the best condition (very low noise and wide RoM) and over 100\% better with physiological artifacts and RoM. Repeatability in the range of a couple of millimeters, on the localization of the centers of rotation, and in the range of one degree, on the axis directions is obtained from real data experiments.}, keywords = {Adult, Algorithms, Animals, Articular, Artificial Intelligence, Automated, Biological, Biomechanics, Cadaver, Ce, Cell Survival, Cochlear Implants, Coin Lesion, Comparative Study, Computer Graphics, Computer Simulation, Computer-Assisted, Face, Female, Finger Joint, Hearing Loss, Humans, Image Enhancement, Image Interpretatio, Image Interpretation, Image Processing, Imaging, Information Storage and Retrieval, Lighting, Linear Models, Male, Models, Movement, Neurons, Non-P.H.S., Non-U.S. Gov't, Numerical Analysis, P.H.S., Pattern Recognition, Photography, Photometry, Programming Languages, Pulmonary, Radiographic Image Enhancement, Radiographic Image Interpretation, Range of Motion, Rats, Reproducibility of Results, Research Support, Rotation, Sensitivity and Specificity, Signal Processing, Software, Spinal Cord, Spiral Ganglion, Statistical, Subtraction Technique, Surgery, Temporal Bone, Three-Dimensional, U.S. Gov't, User-Computer Interface, Video Recording, Wrist Joint, ll Count, n, 15868731}, owner = {Administrator}, pmid = {15868731}, timestamp = {2006.04.20}, } @CONFERENCE{Chao2005, author = {Chao Li; Barreto, A.; Jing Zhai; Chin, C.;}, title = {Exploring face recognition by combining 3D profiles and contours}, booktitle = {SoutheastCon, 2005. Proceedings. IEEE}, year = {2005}, abstract = {Most of the face recognition research performed in the past used 2D intensity images obtained by a photographic camera as the data format for processing, but the algorithms developed based on 2D images are not robust to changes of the conditions in which the images are taken, like the illumination of the environment and the orientation of the subject. With the development of 3D imaging techniques, 3D face recognition is becoming a natural choice to overcome the shortcomings of 2D face recognition, since a 3D face image records the exact geometry of the subject, invariant to illumination and the orientation changes. In this paper, a new algorithm for automatic face recognition, based on the characterization of faces by their contours and profiles, is proposed. Experiments show that the central vertical profile and the contour are both very useful features for face recognition. When combined, better recognition rates can be obtained than just using any of them alone. The performance of the algorithm is also compared with that of the traditional principal component analysis method using a database of 80 subjects. Results show that our method, which characterizes a face through its central vertical profile and contour, can achieve better results and requires less computational power in processing this test database.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Ciobanu2006, author = {Octavian Ciobanu}, title = {{T}he use of a {C}omputer {A}ided {D}esign ({CAD}) environment in 3{D} reconstruction of anatomic surfaces.}, journal = {Stud Health Technol Inform}, year = {2006}, volume = {119}, pages = {102--104}, abstract = {Paper presents an evaluation and comparison of two different types of software for generating a 3D model from medical imaging data: first, a dedicated 3D reconstruction Mimics interface, by Materialise and second, an engineering CAD (a Solid Works and AutoCAD) interface. Advantages and limitations of both software types are outlined and there some observations for 3D reconstruction of anatomic surfaces are presented.}, keywords = {Algorithms, Anatomic, Animals, Clitoris, Comparative Study, Computer-Aided Design, Computer-Assisted, Connective Tissue, Extramural, Female, Finite Element Analysis, Histamine H1 Antagonists, Humans, Hyaenidae, Image Processing, Imaging, Loratadine, Male, Mice, Models, N.I.H., Non-Sedating, Penis, Programming Languages, Research Support, Robotics, Software, Three-Dimensional, Urogenital Surgical Procedures, User-Computer Interface, Video-Assisted Surgery, 16404025}, owner = {Administrator}, pmid = {16404025}, timestamp = {2006.04.20}, } @ARTICLE{Daul2005a, author = {Christian Daul and Pierre Graebling and Alain Tiedeu and Didier Wolf}, title = {3-{D} reconstruction of microcalcification clusters using stereo imaging: algorithm and mammographic unit calibration.}, journal = {IEEE Trans Biomed Eng}, year = {2005}, volume = {52}, pages = {2058--2073}, number = {12}, month = {Dec}, abstract = {The three-dimensional (3-D) shape of microcalcification clusters is an important indicator in early breast cancer detection. In fact, there is a relationship between the cluster topology and the type of lesion (malignant or benign). This paper presents a 3-D reconstruction method for such clusters using two 2-D views acquired during standard mammographic examinations. For this purpose, the mammographic unit was modeled using a camera with virtual optics. This model was used to calibrate the acquisition unit and then to reconstruct the clusters in the 3-D space after microcalcification segmentation and matching. The proposed model is hardware independent since it is suitable for digital mammographic units with different geometries and with various physical acquisition principles. Three-dimensional reconstruction results are presented here to prove the validity of the method. Tests were first performed using a phantom with a well-known geometry. The latter contained X-ray opaque glass balls representing microcalcifications. The positions of these balls were reconstructed with a 16.25-microm mean accuracy. This very high inherent algorithm accuracy is more than enough for a precise 3-D cluster representation. Further validation tests were carried out using a second phantom including a spherical cluster. This phantom was built with materials simulating the behavior of both mammary tissue and microcalcifications toward Xrays. The reconstructed shape was effectively spherical. Finally, reconstructions were carried out for real clusters and their results are also presented.}, keywords = {Algorithms, Animals, Aortic Rupture, Arabidopsis, Artificial Intelligence, Automated, Biol, Biological, Breast Neoplasms, Calcinosis, Calibration, Carcinoma, Cattle, Cell Membrane, Cell Shape, Cell Size, Comp, Computer-Assisted, Connective Tissue, Crystalline, Cystoscopy, Diagnostic Techniques, Elasticity, Electron, Endoscopy, Female, Flowers, Fluorescence, Golgi Apparatus, Green Fluorescent Proteins, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Immunohistochemistry, Lens, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Mammography, Mechanical, Meristem, Microscopy, Microtomy, Models, Neoplasms, Non-U.S. Gov't, Nonpenetrating, Ophthalmological, Optic Disk, Pattern Recognition, Phantoms, Photogrammetry, Photography, Plant Shoots, Precancerous Conditions, Radiographic Image Enhancement, Radiographic Image Interpretation, Reproducibility of Results, Research Support, Scanning, Sensitivity and Specificity, Shear Strength, Stress, Three-Dimensional, Tomography, Ultrasonic Therapy, Ureteral Diseases, Urethral Diseases, Urologic Diseases, Video, Wounds, X-Ray Computed, ogical, uter-Assisted, 16366229}, owner = {Administrator}, pmid = {16366229}, timestamp = {2006.04.20}, } @ARTICLE{Delorme2003, author = {Delorme, S.; Petit, Y.; de Guise, J.A.; Labelle, H.; Aubin, C.-E.; Dansereau, J.;}, title = {Assessment of the 3-D reconstruction and high-resolution geometrical modeling of the human skeletal trunk from 2-D radiographic images}, journal = {Biomedical Engineering, IEEE Transactions}, year = {2003}, volume = {50}, pages = {989 - 998}, abstract = {This paper presents an in vivo validation of a method for the three-dimensional (3-D) high-resolution modeling of the human spine, rib cage, and pelvis for the study of spinal deformities. The method uses an adaptation of a standard close-range photogrammetry method called direct linear transformation to reconstruct the 3-D coordinates of anatomical landmarks from three radiographic images of the subject's trunk. It then deforms in 3-D 1-mm-resolution anatomical primitives (reference bones) obtained by serial computed tomography-scan reconstruction of a dry specimen. The free-form deformation is calculated using dual kriging equations. In vivo validation of this method on 40 scoliotic vertebrae gives an overall accuracy of 3.3 /spl plusmn/ 3.8 mm, making it an adequate tool for clinical studies and mechanical analysis purposes.}, owner = {Administrator}, timestamp = {2006.04.19}, } @MISC{eid-fusion, author = {Ahmed Eid and Aly Farag}, title = {On the Fusion of 3-D Reconstruction Techniques}, url = {citeseer.ist.psu.edu/704175.html}, } @CONFERENCE{Farag2005, author = {Farag, A.; Eid, A.;}, title = {A silhouette-contour based 3-D registration methodology as a pre-evaluation step of 3-D reconstruction techniques}, booktitle = {Image Processing, 2005. ICIP 2005. IEEE International Conference on Volume 3, 11-14 Sept. 2005 Page(s):II - 505-8}, year = {2005}, abstract = {Data registration is a crucial step in performance evaluation procedures that aim at localizing errors in given measured data. Under the performance evaluation topic, the probably corrupted measured data should be accurately registered/aligned to the ground truth data such that the registration process would not affect the accuracy of the consequent evaluation steps. To cope with this problem, another registration methodology that can go beyond the conventional ones should be used. Here we propose a novel approach for 3-D data registration. The performance of the approach is totally independent of the measured data set. The key advantage of this approach is that it keeps the registration process away from being affected by the probably corrupted data sets, hence it permits confidential evaluation results.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Fristrup2004, author = {C. W. Fristrup and T. Pless and J. Durup and M. B. Mortensen and H. O. Nielsen and C. P. Hovendal}, title = {{A} new method for three-dimensional laparoscopic ultrasound model reconstruction.}, journal = {Surg Endosc}, year = {2004}, volume = {18}, pages = {1601--1604}, number = {11}, month = {Nov}, abstract = {BACKGROUND: Laparoscopic ultrasound is an important modality in the staging of gastrointestinal tumors. Correct staging depends on good spatial understanding of the regional tumor infiltration. Three-dimensional (3D) models may facilitate the evaluation of tumor infiltration. The aim of the study was to perform a volumetric test and a clinical feasibility test of a new 3D method using standard laparoscopic ultrasound equipment. METHODS: Three-dimensional models were reconstructed from a series of two-dimensional ultrasound images using either electromagnetic tracking or a new 3D method. The volumetric accuracy of the new method was tested ex vivo, and the clinical feasibility was tested on a small series of patients. RESULTS: Both electromagnetic tracked reconstructions and the new 3D method gave good volumetric information with no significant difference. Clinical use of the new 3D method showed accurate models comparable to findings at surgery and pathology. CONCLUSIONS: The use of the new 3D method is technically feasible, and its volumetrically, accurate compared to 3D with electromagnetic tracking.}, doi = {10.1007/s00464-003-9282-7}, keywords = {Algorithms, Artificial Intelligence, Biological, Cadaver, Ce, Cell Survival, Cochlear Implants, Coin Lesion, Computer Graphics, Computer Simulation, Computer-Assisted, Female, Hearing Loss, Humans, Image Processing, Imaging, Male, Models, Non-U.S. Gov't, Programming Languages, Pulmonary, Radiographic Image Enhancement, Radiographic Image Interpretation, Research Support, Software, Spiral Ganglion, Surgery, Temporal Bone, Three-Dimensional, User-Computer Interface, ll Count, 15931487}, owner = {Administrator}, pmid = {15931487}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1007/s00464-003-9282-7}, } @ARTICLE{Gao2005, author = {Jianxin Gao and Wei Xu and Jianping Geng}, title = {{U}se of shadow-speckle correlation method for 3{D} tooth model reconstruction.}, journal = {Int J Prosthodont}, year = {2005}, volume = {18}, pages = {436--437}, number = {5}, abstract = {This study presents a method of using shadow-speckle correlation to reconstruct a 3-dimensional (3D) tooth model. Compared with other methods based on laser or optical geometric measurements, the shadow-speckle method overcomes their limitations by using a digital image correlation to reconstruct a 3D tooth model. Using plaster models 4 times the normal tooth size showed that the accuracy of the reconstructed model was estimated at roughly 30 microm, which potentially could be used in direct intraoral applications.}, keywords = {Animals, Blood Vessels, Cardiovascular System, Computer-Assisted, Confocal, Dental Models, Fluorescence, Humans, Image Processing, Imaging, Microscopy, Non-U.S. Gov't, Research Support, Three-Dimensional, Zebrafish, 16220812}, owner = {Administrator}, pmid = {16220812}, timestamp = {2006.04.20}, } @ARTICLE{Guidi2004, author = {Guidi, G.; Beraldin, J.-A.; Atzeni, C.;}, title = {High-accuracy 3D modeling of cultural heritage: the digitizing of Donatello's "Maddalena"}, journal = {Image Processing, IEEE Transactions}, year = {2004}, volume = {13}, pages = {370 - 380}, abstract = {Three-dimensional digital modeling of heritage works of art through optical scanners, has been demonstrated in recent years with results of exceptional interest. However, the routine application of three-dimensional (3D) modeling to heritage conservation still requires a systematic investigation of a number of technical problems. The paper describes the process of acquiring a 3D digital model of the Maddalena by Donatello, a wooden statue representing one of the major masterpieces of the Italian Renaissance which was swept away by the Florence flood of 1966, and subsequently restored. The paper reports all the steps of the acquisition procedure, from the project planning to the solution of the various problems due to range camera calibration and to optically noncooperative material. Since the scientific focus is centered on the 3D model's overall dimensional accuracy, a methodology for its quality control is described. Such control has demonstrated how, in some situations, the ICP-based alignment can lead to incorrect results. To circumvent this difficulty, we propose an alignment technique based on the fusion of ICP (iterative closest point) with close-range digital photogrammetry and a noninvasive procedure in order to generate a final accurate model. Detailed results are presented, demonstrating the improvement of the final model, and how the proposed sensor fusion ensures a prespecified level of accuracy.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Guidi2003a, author = {Guidi, G.; Beraldin, J.-A.; Ciofi, S.; Atzeni, C.;}, title = {Fusion of range camera and photogrammetry: a systematic procedure for improving 3-D models metric accuracy}, journal = {Systems, Man and Cybernetics, Part B, IEEE Transactions}, year = {2003}, volume = {33}, pages = {667 - 676}, abstract = {The generation of three-dimensional (3-D) digital models produced by optical technologies in some cases involves metric errors. This happens when small high-resolution 3-D images are assembled together in order to model a large object. In some applications, as for example 3-D modeling of Cultural Heritage, the problem of metric accuracy is a major issue and no methods are currently available for enhancing it. The authors present a procedure by which the metric reliability of the 3-D model, obtained through iterative alignments of many range maps, can be guaranteed to a known acceptable level. The goal is the integration of the 3-D range camera system with a close range digital photogrammetry technique. The basic idea is to generate a global coordinate system determined by the digital photogrammetric procedure, measuring the spatial coordinates of optical targets placed around the object to be modeled. Such coordinates, set as reference points, allow the proper rigid motion of few key range maps, including a portion of the targets, in the global reference system defined by photogrammetry. The other 3-D images are normally aligned around these locked images with usual iterative algorithms. Experimental results on an anthropomorphic test object, comparing the conventional and the proposed alignment method, are finally reported.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{, author = {Guotao Wang, Caroline Merrill, Jie-Hua Zhao, Steven K. Groothuis and Paul S. Ho}, title = {Packaging Effects on Reliability of Cu/Low-k Interconnects}, journal = {IEEE TRANSACTIONS ON DEVICE AND MATERIALS RELIABILITY}, year = {2003}, volume = {3}, number = {4}, month = {DECEMBER}, abstract = {Abstract—Chip-packaging interaction is becoming a critical reliability issue for Cu/low- chips during assembly into a plastic flip-chip package. With the traditional TEOS interlevel dielectric being replaced by much weaker low- dielectrics, packaging induced interfacial delamination in low- interconnects has been widely observed, raising serious reliability concerns for Cu/lowchips. In a flip-chip package, the thermal deformation of the package can be directly coupled into the Cu/low- interconnect structure inducing large local deformation to drive interfacial crack formation. In this paper, we summarize experimental and modeling results from studies performed in our laboratory to investigate the chip-package interaction and its impact on lowinterconnect reliability. We first review the experimental techniques for measuring thermal deformation in a flip-chip package and interfacial fracture energy for low- interfaces. Then results from three-dimensional finite element analysis (FEA) based on a multilevel submodeling approach in combination with high-resolution moiré interferometry to investigate the chip-package interaction for low- interconnects are discussed. Packaging induced crack driving forces for relevant interfaces in Cu/lowstructures are deduced and compared with corresponding interfaces in Cu/TEOS and Al/TEOS structures to assess the effect of ILD on packaging reliability. Our results indicate that packaging assembly can significantly impact wafer-level reliability causing interfacial delamination to become a serious reliability concern for Cu/low- structures.}, owner = {Administrator}, pdf = {C:\Documents and Settings\Administrator\Desktop\Seminario\biblio\01261725.pdf}, timestamp = {2006.04.27}, } @ARTICLE{Hagen2005, author = {G. Hagen and P. G. Lindgren and L. Jangland and P. Magnusson and A. Magnusson}, title = {{A}rtifacts in 3{D} rotational angiography: an experimental study.}, journal = {Acta Radiol}, year = {2005}, volume = {46}, pages = {32--36}, number = {1}, month = {Feb}, abstract = {PURPOSE: To investigate artifacts in three-dimensional rotational angiography (3D-RA) in an experimental model and to evaluate which parameters influence their distribution. MATERIAL AND METHODS: 3D-RA was carried out in a circular vessel phantom filled with contrast medium. Two different rotational angulations were used: 160 degrees causing 64 images and 180 degrees causing 90 or 120 images. The images were transferred to one workstation for reconstruction of axial slices and then to another workstation for 3D reconstructions. The 3D reconstructions were compared with standardized threshold settings. RESULTS: The artifacts occurred where the vessel had a longer path parallel to the rotation plane and became increasingly pronounced when the threshold level was raised. The artifacts decreased in size when rotation angle and number of projections were increased. CONCLUSION: The quality of the 3D reconstructions from RA was degraded by beam-hardening and sampling artifacts. The sampling artifacts were diminished by increasing both the rotation angle and the number of projections. The distortions in the 3D reconstructions caused by beam-hardening remain to be resolved. The threshold values also had a considerable influence on the 3D reconstructions.}, keywords = {, Adult, Algorithms, Angiography, Animals, Arthroplasty, Articular, Artifacts, Artificial Intelligence, Automated, Biological, Biomechanics, Bone Substitutes, Cadaver, Cardiovascular, Ce, Cell Survival, Cochlear Implants, Coin Lesion, Comparative Study, Computer Graphics, Computer Simulation, Computer-Aided Design, Computer-Assisted, Contrast Media, Durapatite, Equipment Failure Analysis, Face, Female, Finger Joint, Finite Element Analysis, Hearing Loss, Hip, Hip Joint, Humans, Image Enhancement, Image Interpretatio, Image Interpretation, Image Processing, Imaging, Information Storage and Retrieval, Joint Instability, Lighting, Linear Models, Male, Metals, Models, Movement, Neurons, Non-P.H.S., Non-U.S. Gov't, Numerical Analysis, P.H.S., Pattern Recognition, Phantoms, Photography, Photometry, Programming Languages, Prosthesis Failure, Pulmonary, Radiographic Image Enhancement, Radiographic Image Interpretation, Range of Motion, Rats, Replacement, Reproducibility of Results, Research Support, Rotation, Sensitivity and Specificity, Signal Processing, Software, Spinal Cord, Spiral Ganglion, Statistical, Subtraction Technique, Surgery, Temporal Bone, Three-Dimensional, Tissue Engineering, Tomography, U.S. Gov't, User-Computer Interface, Video Recording, Wrist Joint, X-Ray Computed, ll Count, n, 15841737}, owner = {Administrator}, pmid = {15841737}, timestamp = {2006.04.20}, } @ARTICLE{Hu2006, author = {Y. Hu and G. H. Glover}, title = {{P}artial-k-space acquisition method for improved {SNR} efficiency and temporal resolution in 3{D} f{MRI}.}, journal = {Magn Reson Med}, year = {2006}, month = {Apr}, abstract = {Previous studies have shown the relative importance of physiological noise and thermal noise in 2D MR images. Since physiological noise is proportional to the signal, it can be the dominant component at the center of k-space. In this study we demonstrate that the signal-to-noise ratio (SNR) efficiency and temporal resolution for 3D functional MRI (fMRI) are increased by the use of a partial-k-space acquisition method. In partial-k-space methods, the high-spatial-frequency components are doubled in amplitude during reconstruction, resulting in twice as much noise from those components. However, in sum these contributions are relatively small compared to those at the low spatial frequencies, where physiological noise is dominant. Therefore, the effect on the final MR images is almost negligible due to the square summation rule. Thus, the partial-k-space 3D method sacrifices much less SNR than is expected from the thermal noise model, and the SNR efficiency is increased compared to a full-k-space acquisition since more time frames can be collected for the same scan time. Accordingly, the temporal resolution can be increased in 3D acquisitions because only partial coverage of k-space is necessary. Experimental results confirm that more activation with a higher average t-score is detected by this method. Magn Reson Med, 2006. (c) 2006 Wiley-Liss, Inc.}, doi = {10.1002/mrm.20877}, keywords = {16598724}, owner = {Administrator}, pmid = {16598724}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1002/mrm.20877}, } @ARTICLE{Huang2006a, author = {Yan Huang and Mbonda Siewe and Sundararajan V Madihally}, title = {{E}ffect of spatial architecture on cellular colonization.}, journal = {Biotechnol Bioeng}, year = {2006}, volume = {93}, pages = {64--75}, number = {1}, month = {Jan}, abstract = {The spatial cell-material interaction remains vital issue in forming biodegradable scaffolds in Tissue Engineering. In this study, to understand the influence of spatial architecture on cellular behavior, 2D and 3D chitosan scaffolds of 50-190 kD and >310 kD MW were synthesized through air drying and controlled rate freezing/lypohilization technique, respectively. In addition, chitosan was emulsified with 19, 76, and 160 kD 50:50 poly lactide-co-glycolide (PLGA) using 1,2-Dimyristoyl-sn-Glycero-3-Phosphocholine (DMPC) as stabilizer. 2D and 3D scaffolds were formed by air drying and lyophilization as before. Tensile and compressive properties of films and scaffolds were analyzed in wet conditions at 37 degrees C. Alterations in the cell spreading, proliferation, and cytoskeletal organization of human umbilical vein endothelial cells (HUVECs) and mouse embryonic fibroblasts (MEFs) were studied. These results showed that the formed 3D chitosan scaffolds had interconnected open pore architecture (50-200 microm size). HUVECs and MEFs had reduced spreading areas and circular morphology on 2D chitosan membranes compared with 3D chitosan scaffolds. The fluorescence photomicrographs for actin (using Alexa Fluor 488 phalloidin) and cytoplasm staining (using carboxyfluorescein diacetate-succinimidyl ester) demonstrated that the cells spread within 3D chitosan matrix. 2D and 3D emulsified chitosan and chitosan/PLGA scaffolds reduced the spreading of HUVECs and MEFs even further. Proliferation results, analyzed via MTT-Formazan assay and BrdU uptake assay, correlated with the spreading characteristics. The reductions in cell spreading area on emulsified surfaces were not detrimental to the viability and endocytic activity but to proliferation. The observed alterations in cellular colonization are in part due to the substrate stiffness and surface topography. In summary, these results suggest a significant influence of spatial architecture on cellular colonization.}, doi = {10.1002/bit.20703}, keywords = {Adolescent, Adult, Aged, Anti-Bacterial Agents, Atomic Force, Braces, Calcium Channels, Caloric Tests, Case-Control Studies, Cell Culture Techniques, Cell Proliferation, Cells, Cervical Vertebrae, Child, Chitosan, Comparative Study, Computer-Assisted, Cultured, Cytoplasmic and Nuclear, Endothelial Cells, English Abstract, Extracellular Matrix, Female, Gentamicins, Head, Humans, Image Processing, Infant, Male, Meniere's Disease, Microscopy, Middle Aged, Non-U.S. Gov't, Nystagmus, Optokinetic, Polyesters, Protein Conformation, Receptors, Research Support, Scapula, Scoliosis, Solutions, Thoracic Vertebrae, Tissue Engineering, Tomography, Treatment Outcome, Umbilical Veins, Vestibular Diseases, Vestibular Function Tests, Vestibule, Vibration, Video Recording, Water, X-Ray Computed, 16142800}, owner = {Administrator}, pmid = {16142800}, timestamp = {2006.04.21}, url = {http://dx.doi.org/10.1002/bit.20703}, } @ARTICLE{Irarrazaval2005, author = {Pablo Irarrazaval and Redha Boubertakh and Reza Razavi and Derek Hill}, title = {{D}ynamic three-dimensional undersampled data reconstruction employing temporal registration.}, journal = {Magn Reson Med}, year = {2005}, volume = {54}, pages = {1207--1215}, number = {5}, month = {Nov}, abstract = {Dynamic 3D imaging is needed for many applications such as imaging of the heart, joints, and abdomen. For these, the contrast and resolution that magnetic resonance imaging (MRI) offers are desirable. Unfortunately, the long acquisition time of MRI limits its application. Several techniques have been proposed to shorten the scan time by undersampling the k-space. To recover the missing data they make assumptions about the object's motion, restricting it in space, spatial frequency, temporal frequency, or a combination of space and temporal frequency. These assumptions limit the applicability of each technique. In this work we propose a reconstruction technique based on a weaker complementary assumption that restricts the motion in time. The technique exploits the redundancy of information in the object domain by predicting time frames from frames where there is little motion. The proposed method is well suited for several applications, in particular for cardiac imaging, considering that the heart remains relatively still during an important fraction of the cardiac cycle, or joint imaging where the motion can easily be controlled. This paper presents the new technique and the results of applying it to knee and cardiac imaging. The results show that the new technique can effectively reconstruct dynamic images acquired with an undersampling factor of 5. The resulting images suffer from little temporal and spatial blurring, significantly better than a sliding window reconstruction. An important attraction of the technique is that it combines reconstruction and registration, thus providing not only the 3D images but also its motion quantification. The method can be adapted to non-Cartesian k-space trajectories and nonuniform undersampling patterns.}, doi = {10.1002/mrm.20671}, keywords = {80 and over, Adipose Tissue, Adult, Aged, Alcohol Withdrawal Seizure, Alcoholism, Algorithms, Anatomic, Angiography, Ankle Joint, Anterior Cerebral Artery, Artificial Intelligence, Biological, Biomechanics, Breast Neoplasms, Carcinoma, Cine, Comparative Study, Computer Simulation, Computer-Assisted, Conformal, Corpus Callosum, Digital Subtraction, Dose Fractionation, Drug Administration Schedule, Echo-Planar Imaging, English Abstract, Extramural, Feasibility Studies, Female, Forecasting, Health Care, Humans, Hypertension, Hypertensive, Image Enhancement, Image Interpretation, Image Processing, Imagi, Imaging, Information Storage and Retrieval, Injections, Intracranial Aneurysm, Intracranial Hemorrhage, Kidney Neoplasms, Lung Neoplasms, Lymph Nodes, Lymphatic Metas, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Male, Mediastinum, Middle Aged, Models, Movement, Multivariate Analysis, Muscle, N.I.H., Neoplasm Staging, Non-Small-Cell Lung, Non-U.S. Gov't, P.H.S., Phonetics, Positron-Emission Tomography, Principal Component Analysis, Probability, Prostate, Prostatic Neoplasms, Quality Assurance, ROC Curve, Radiopharmaceuticals, Radiotherapy, Radiotherapy Planning, Reference Standards, Reproducibility of Results, Research Support, Sample Size, Sensitivity and Specificity, Skeletal, Software Validation, Sound Spectrography, Statistical, Subtraction Technique, Three-Dimensional, Time Factors, Tomography, Tongue, Transducers, Treatment Outcome, U.S. Gov't, Ultrasonography, User-Computer Interface, Water, Whole Body Imaging, Whole-Body Counting, X-Ray Computed, ng, s, tasis, 16187276}, owner = {Administrator}, pmid = {16187276}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1002/mrm.20671}, } @ARTICLE{Irene2005, author = {Irene Cheng; Boulanger, P.;}, title = {Feature extraction on 3-D TexMesh using scale-space analysis and perceptual evaluation}, journal = {Circuits and Systems for Video Technology, IEEE Transactions}, year = {2005}, volume = {15}, pages = {1234 - 1244}, abstract = {Efficient online visualization of three-dimensional (3-D) textured models is essential for a variety of applications including not only games and e-commerce, but also heritage and medicine. To visualize 3-D objects online, it is necessary to quickly adapt both mesh and texture to the available computational or network resources. Earlier research showed that after reaching a minimum required mesh density, high-resolution texture has more impact on human perception than a denser mesh. Given limited bandwidth, an important issue is how to extract features that best represent the original object, and how to allocate resources between mesh and texture data to achieve optimal perceptual quality. In this paper, we propose a textured mesh (TexMesh) model, which applies scale-space analysis and perceptual evaluation to extract 3-D features for textured mesh simplification and transmission. Texture data is divided into fragments to facilitate quality and bandwidth adaptation. Texture quality assignment is based on feature point distribution. Online transmission is based on statistics gathered during preprocessing, which are stored in a priority queue and lookup tables. Quality of service requested by a client site can be met by applying an efficient adaptive algorithm to ensure optimal use of the specified time and available bandwidth, and at the same time preserving satisfactory quality. Our TexMesh framework integrates feature extraction, mesh simplification, texture reduction, bandwidth adaptation, and perceptual evaluation into a multiscale visualization framework.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Ishiyama2005, author = {Ishiyama, R.; Hamanaka, M.; Sakamoto, S.;}, title = {An appearance model constructed on 3-D surface for robust face recognition against pose and illumination variations}, journal = {Systems, Man and Cybernetics, Part C, IEEE Transactions}, year = {2005}, volume = {35}, pages = {326 - 334}, abstract = {We propose a face recognition method that is robust against image variations due to arbitrary lighting and a large extent of pose variations, ranging from frontal to profile views. Existing appearance models defined on image planes are not applicable for such pose variations that cause occlusions and changes of silhouette. In contrast, our method constructs an appearance model of a three-dimensional (3-D) object on its surface. Our proposed model consists of a 3-D shape and geodesic illumination bases (GIBs). GIBs can describe the irradiances of an object's surface under any illumination and generate illumination subspace that can describe illumination variations of an image in an arbitrary pose. Our appearance model is automatically aligned to the target image by pose optimization based on a rough pose, and the residual error of this model fitting is used as the recognition score. We tested the recognition performance of our method with an extensive database that includes 14 000 images of 200 individuals with drastic illumination changes and pose variations up to 60/spl deg/ sideward and 45/spl deg/ upward. The method achieved a first-choice success ratio of 94.2% without knowing precise poses a priori.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Jacobi2004, author = {Ute Jacobi and Mai Chen and Gottfried Frankowski and Ronald Sinkgraven and Martina Hund and Berthold Rzany and Wolfram Sterry and Jürgen Lademann}, title = {{I}n vivo determination of skin surface topography using an optical 3{D} device.}, journal = {Skin Res Technol}, year = {2004}, volume = {10}, pages = {207--214}, number = {4}, month = {Nov}, abstract = {BACKGROUND/PURPOSE: Topography of the skin surface is a mirror of the functional skin status. Therefore, its evaluation is of great interest for dermatological research. In the present study, a new optical measuring system was applied to evaluate human skin surface topography in vivo and non-invasively, in order to determine elastotic and mimic wrinkles dependent on age, body site and therapy. METHODS: The measurements were performed on the back (n=5), the flexor forearm (n=14) of volunteers in different age groups and on the face of women (n=4) participating in an anti-wrinkle study. The evaluation of the three-dimensional-profiles was performed determining skin surface parameters (mean roughness (R(a)), mean depth of roughness (R(z)), maximum roughness (R(m)) and waviness (W(t))) and applying Fourier analysis. RESULTS: Significant increases in all surface parameters were obtained on the forearms with increasing age. Differences between the surface topographies of forearm and back were only expressed by the waviness and the Fourier analysis. The treatment with botulinum Toxin A led to a diminution of mimic wrinkles as reflected by the furrow profiles. CONCLUSIONS: The results show a significant dependence of the skin surface topography on the age of the volunteer and the body site measured. Particularly the waviness, the Fourier analysis and the furrow profiles reflect such dependencies. The system used also fulfils the requirements for the testing of therapies, as was demonstrated by the reduction of mimic wrinkles after treatment with botulinum Toxin A.}, doi = {10.1111/j.1600-0846.2004.00075.x}, keywords = {Acoustics, Acrylic Resins, Actins, Adolescent, Adult, Aged, Alveolar Process, Anatomic, Animals, Articular, Biological, Calcium, Calcium Carbonate, Cardiac, Cartilage, Cell Adhesion, Cell Differentiation, Cell Line, Cell Membrane, Cell Movement, Cell Proliferation, Cell Size, Cells, Cephalometry, Child, Collagen, Comparative Study, Computer Simulation, Computer-Assisted, Cultured, Cytoskeleton, Dental Enamel, Dentin, Dentition, Dermoscopy, Electrodes, Electroencephalography, Epilepsies, Equipment Design, Equipment Failure Analysis, Extracellular Matrix, Facial Asymmetry, Female, Fibrinogen, Fibroblasts, Fibronectins, Fluorescence, Gene Expression Regulation, Geology, Humans, Image Interpretation, Image Processing, Imaging, Implanted, Incisor, Infant, Inferior, Liver, Liver Circulation, Magnetic Resonance Imaging, Male, Mandible, Mandibular Condyle, Maxilla, Mechanical, Mice, Microcomputers, Microfluidics, Microscopy, Mid, Middle Aged, Models, Moire Topography, Molar, Myocytes, NIH 3T3 Cells, Nasal Bone, Neocortex, Non-P.H.S., Non-U.S. Gov't, O, Orbit, Osteoarthritis, P.H.S., Partial, Physics, Portal Vein, Preschool, Pseudopodia, Research Support, Retrospective Studies, Scoliosis, Sella Turcica, Severity of Illness Index, Sex Factors, Signal Transduction, Skin, Skin Aging, Software, Sphenoid Bone, Spiral Computed, Statistical, Stress, Subdural Space, Surface Properties, Swine, Three-Dimensional, Thumb, Tomography, Tooth, Transfection, U.S. Gov't, User-Computer Interface, Vena Cava, Wrist Joint, X-Ray Computed, dle Aged, ptical, 44}, owner = {Administrator}, pii = {SRT75}, pmid = {44}, timestamp = {2006.04.21}, url = {http://dx.doi.org/10.1111/j.1600-0846.2004.00075.x}, } @CONFERENCE{Jantarang2004, author = {Jantarang, S.; Panjapornpon, J.;}, title = {Enhancement of 3-D reconstruction from 2-D images using single camera}, booktitle = {TENCON 2004. 2004 IEEE Region 10 Conference Volume A, 21-24 Nov. 2004 Page(s):407 - 410 Vol. 1}, year = {2004}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{, author = {Ján Bartl, Roman Fíra, Miroslav Hain}, title = {INSPECTION OF SURFACE BY THE MOIRÈ METHOD}, journal = {MEASUREMENT SCIENCE REVIEW}, year = {2001}, volume = {1}, number = {1}, abstract = {A moirè method is one of the optical methods which are suitable for measurement of length, angle of rotation and also contactless surface shape deviation evaluation. The article is concerned on the possibilities of application this method by the evaluation of plane surface deviation of the semiconductor wafers.}, owner = {Administrator}, pdf = {C:\Documents and Settings\Administrator\Desktop\Seminario\biblio\Bartl.pdf}, timestamp = {2006.04.27}, } @ARTICLE{Kiessling2005, author = {Fabian Kiessling and Martin Le-Huu and Tobias Kunert and Matthias Thorn and Silvia Vosseler and Kerstin Schmidt and Johannes Hoffend and Hans-Peter Meinzer and Norbert E Fusenig and Wolfhard Semmler}, title = {{I}mproved correlation of histological data with {DCE} {MRI} parameter maps by 3{D} reconstruction, reslicing and parameterization of the histological images.}, journal = {Eur Radiol}, year = {2005}, volume = {15}, pages = {1079--1086}, number = {6}, month = {Jun}, abstract = {Due to poor correlation of slice thickness and orientation, verification of radiological methods with histology is difficult. Thus, a procedure for three-dimensional reconstruction, reslicing and parameterization of histological data was developed, enabling a proper correlation with radiological data. Two different subcutaneous tumors were examined by MR microangiography and DCE-MRI, the latter being post-processed using a pharmacokinetic two-compartment model. Subsequently, tumors were serially sectioned and vessels stained with immunofluorescence markers. A ray-tracing algorithm performed three-dimensional visualization of the histological data, allowing virtually reslicing to thicker sections analogous to MRI slice geometry. Thick slices were processed as parameter maps color coding the marker density in the depth of the slice. Histological 3D reconstructions displayed the diffuse angioarchitecture of malignant tumors. Resliced histological images enabled specification of high enhancing areas seen on MR microangiography as large single vessels or vessel assemblies. In orthogonally reconstructed histological slices, single vessels were delineated. ROI analysis showed significant correlation between histological parameter maps of vessel density and MR parameter maps (r=0.83, P=0.05). The 3D approach to histology improves correlation of histological and radiological data due to proper matching of slice geometry. This method can be used with any histological stain, thus enabling a multivariable correlation of non-invasive data and histology.}, doi = {10.1007/s00330-005-2701-5}, keywords = {Algorithms, Animals, Artificial Intelligence, Arvicolinae, Automated, Autoradiography, Bacteriophage mu, Biological, Brain, Calibration, Carcinoma, Cluster Analysis, Comparative Study, Computer Simulation, Computer-Assisted, DNA Transposable Elements, Deafness, Diastema, Electron, Energy-Filtering Transmission Electron, Epithelium, Fluorescent Antibody Technique, Fluorodeoxyglucose F18, Gestational Age, Glucose, Hepatocellular, Histocytochemistry, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Indirect, Information Storage and Retrieval, Kidney, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Mice, Microscopy, Models, Molar, Neurological, Non-U.S. Gov't, Nude, Odontogenesis, Pattern Recognition, Photogrammetry, Protein Structure, Radiopharmaceuticals, Rats, Research Support, Scanning Transmission, Signal Processing, Skin Neoplasms, Spleen, Statistical, Subtraction Technique, Tertiary, Three-Dimensional, Tooth Germ, Transposases, Visible Human Project, 15747142}, owner = {Administrator}, pmid = {15747142}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1007/s00330-005-2701-5}, } @ARTICLE{Klarhoefer2003, author = {Markus Klarhöfer and Bixente Dilharreguy and Peter van Gelderen and Chrit T W Moonen}, title = {{A} {PRESTO}-{SENSE} sequence with alternating partial-{F}ourier encoding for rapid susceptibility-weighted 3{D} {MRI} time series.}, journal = {Magn Reson Med}, year = {2003}, volume = {50}, pages = {830--838}, number = {4}, month = {Oct}, abstract = {A 3D sequence for dynamic susceptibility imaging is proposed which combines echo-shifting principles (such as PRESTO), sensitivity encoding (SENSE), and partial-Fourier acquisition. The method uses a moderate SENSE factor of 2 and takes advantage of an alternating partial k-space acquisition in the "slow" phase encode direction allowing an iterative reconstruction using high-resolution phase estimates. Offering an isotropic spatial resolution of 4 x 4 x 4 mm(3), the novel sequence covers the whole brain including parts of the cerebellum in 0.5 sec. Its temporal signal stability is comparable to that of a full-Fourier, full-FOV EPI sequence having the same dynamic scan time but much less brain coverage. Initial functional MRI experiments showed consistent activation in the motor cortex with an average signal change slightly less than that of EPI.}, doi = {10.1002/mrm.10599}, keywords = {-Ray Computed, 80 and over, Abnormalities, Acute Disease, Adolescent, Adult, Aged, Algorithms, Alzheimer Disease, Aneurysm, Animals, Artifacts, Autopsy, Biocompatible Materials, Biomedical, Bone Morphogenetic Proteins, Bone Regeneration, Bone Screws, Brain, Brain Neoplasms, Breast Neoplasms, Calibration, Carboxymethylcellulose, Carcinoma, Cerebrovascular Circulation, Child, Collagen, Comp, Comparative Study, Computer Simulation, Computer Systems, Computer-Aided Design, Computer-Assisted, Conformal, Congenital, Contrast Media, Craniotomy, Dementia, Dental, Diverticulum, Ductus Arteriosus, Ear, Echocardiography, Echoencephalography, Electrocardiography, Emission-Computed, English Abstract, Equipment Design, Equipment Failure, Esthetics, External, Female, First, Fluorescent Dyes, Fluorodeoxyglucose F18, Follow-Up Studies, Forecasting, Forensic Medicine, Fourier Analysis, Gadolinium DTPA, Glioma, Growth Substances, Gunshot, Heart, Heart Diseases, Heart Ventricles, Hip Dislocation, Humans, Image Enhancement, Image Processi, Image Processing, Imaging, Immobilization, Infant, Internal Fixators, Ischemia, Lasers, Leg, Lewy Body Disease, Lumbar Vertebrae, Lung, Lung Neoplasms, Lymphatic Irradiation, Lymphatic Metastasis, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Male, Mandible, Mandibular Injuries, Maxilla, Middle Aged, Multiple, Myocardial Contraction, Neck, Non-P.H.S., Non-Small-Cell Lung, Non-U.S. Gov't, Observer Variation, Operating Room Information Systems, Oral Surgical Procedures, P.H.S., Parkinson Disease, Phantoms, Photogrammetry, Polymethyl Methacrylate, Postoperative Complica, Postoperative Complications, Predictive Value of Tests, Pregnancy, Pregnancy Trimester, Prenatal, Preschool, Progno, Prospective Studies, Prosthe, Prostheses and Implants, Prosthesis Design, Prosthesis Fitting, Pulmonary Artery, Pulmonary Embolism, Quality of Life, Ra, Radiographic Image Enhancement, Radiographic Image Inter, Radiography, Radiopharmaceuticals, Radiotherapy, Radiotherapy Dosage, Radiotherapy Planning, Recombinant Proteins, Reference Values, Reproducibility of Results, Research Support, Respiration, Retrospective Studies, Ruptur, Sensitivity and Specificity, Single-Photon, Skull, Software, Spinal Diseases, Spinal Fractures, Spinal Fusion, Spiral Computed, Statistics, Stroke Volume, Surface Properties, Surgery, Survival Rate, Swine, Technology, Technology Assessment, Thoracic, Thoracic Vertebrae, Thoracic Wall, Three-Dimensional, Thrombosis, Time Factors, Titanium, Tomography, Transforming Growth Factor beta, U.S. Gov't, Ultrasonography, Urodynamics, User-Computer Interface, Vesico-Ureteral Reflux, Wounds, X, X-Ray Computed, diotherapy Planning, ed, ng, pretation, ses and Implants, sis, tions, uter-Assisted, 14523970}, owner = {Administrator}, pmid = {14523970}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1002/mrm.10599}, } @ARTICLE{Kodama2005, author = {Tetsuji Kodama and Xiaoyuan Li and Kenji Nakahira and Dai Ito}, title = {{E}volutionary computation applied to the reconstruction of 3-{D} surface topography in the {SEM}.}, journal = {J Electron Microsc (Tokyo)}, year = {2005}, volume = {54}, pages = {429--435}, number = {5}, month = {Oct}, abstract = {A genetic algorithm has been applied to the line profile reconstruction from the signals of the standard secondary electron (SE) and/or backscattered electron detectors in a scanning electron microscope. This method solves the topographical surface reconstruction problem as one of combinatorial optimization. To extend this optimization approach for three-dimensional (3-D) surface topography, this paper considers the use of a string coding where a 3-D surface topography is represented by a set of coordinates of vertices. We introduce the Delaunay triangulation, which attains the minimum roughness for any set of height data to capture the fundamental features of the surface being probed by an electron beam. With this coding, the strings are processed with a class of hybrid optimization algorithms that combine genetic algorithms and simulated annealing algorithms. Experimental results on SE images are presented.}, doi = {10.1093/jmicro/dfi062}, keywords = {'t, 80 and ove, 80 and over, Abdominal, Adult, Aged, Algorithms, Anatomy, Animals, Anisotropy, Aorta, Arthrography, Artificial Intelligence, Asian Continental Ancestry Group, Automated, Biological, Blood Flow Velocity, Blood Pressure, Body Constitution, Breast, Breast Neoplasms, Cadaver, Carcinoma, Cardiovascular, Comparative Study, Computer Simulation, Computer-Assisted, Confocal, Coronary Angiography, Coronary Arteriosclerosis, Coronary Stenosis, Cross-Sectional, Data Compression, Elasticity, Extramural, Feasibility Studies, Fem, Female, Finite Element Analysis, Fluorescence, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Infarction, Information Storage and Retrieval, Joints, Kidney, Leg, Magnetic Resonance Imaging, Male, Mice, Microscopy, Microsurgery, Microtomy, Middle Aged, Models, Morphogenesis, Myocardial Infarction, N.I.H., Nasal Bone, Neoplasm Invasiveness, Neoplasm Staging, Neuronavigation, Non-P.H.S., Non-U.S. Gov, Non-U.S. Gov't, Organ Size, P.H.S., Pattern Recognition, Phantoms, Photogrammetry, Pilot Projects, Preoperative Care, Principal Component Analysis, Protoplasts, Pulsatile Flow, Radiographic Image Enhancement, Radiographic Image Interpretation, Repro, Reproducibility of Results, Research Support, Rheology, Ribs, Scoliosis, Sensitivity and Specificity, Shear Strength, Signal Processing, Squamous Cell, Statistical, Statistics, Stomach Neoplasms, Subtraction Technique, Surgery, Systems Integration, Temporal Bone, Three-Dimensional, Tobacco, Tomography, Transgenic, U.S. Gov't, United State, User-Computer Interface, Uterine Cervical Neoplasms, Vacuoles, Video, Video Recording, Visible Human Project, Whole-Body Counting, ale, ducibility of Results, r, s, 16195361}, owner = {Administrator}, pii = {dfi062}, pmid = {16195361}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1093/jmicro/dfi062}, } @CONFERENCE{Lee;2002, author = {Chul-Soo Ye; Kwae-Hi Lee;}, title = {3-D reconstruction of man-made objects based on watershed segmentation and 3-D grouping}, booktitle = {Industrial Electronics, 2002. ISIE 2002. Proceedings of the 2002 IEEE International Symposium on Volume 2, 8-11 July 2002 Page(s):453 - 456 vol.2}, year = {2002}, abstract = {This paper presents a method for automatic 3-D reconstruction of man-made objects using high resolution aerial imagery. The proposed method consists of three parts. First, by using mean curvature diffusion, noise is eliminated and edges are preserved. Next, images are segmented by a watershed algorithm. Finally, man-made objects are modeled as a set of planar polygonal patches. A roof of man-made object is described as a set of planar polygonal patches, each of which is extracted by watershed-based image segmentation, line segment matching and coplanar grouping. The coplanar grouping process can be restricted to the 3-D line segments from the region boundary. Coplanar grouping and polygonal patch formation is performed per region by selecting 3-D line segments that are matched using epipolar geometry and flight information. The algorithm has been applied to high resolution aerial images and the results show accurate reconstruction of man-made objects.}, owner = {Administrator}, timestamp = {2006.04.19}, } @MISC{leung-reconstruction, author = {Carlos Leung and Brian C. Lovell}, title = {3D Reconstruction through Segmentation of Multi-View Image Sequences}, abstract = {We propose what we believe is a new approach to 3D reconstruction through the design of a 3D voxel volume, such that all the image information and camera geometry are embedded into one feature space. By customising the volume to be suitable for segmentation, the key idea that we propose is the recovery of a 3D scene through the use of globally optimal geodesic active contours. We also present an extension to this idea by proposing the novel design of a 4D voxel volume to analyse the stereo motion problem in multi-view image sequences.}, url = {citeseer.ist.psu.edu/684705.html}, } @ARTICLE{Lhuillier2005, author = {Maxime Lhuillier and Long Quan}, title = {{A} quasi-dense approach to surface reconstruction from uncalibrated images.}, journal = {IEEE Trans Pattern Anal Mach Intell}, year = {2005}, volume = {27}, pages = {418--433}, number = {3}, month = {Mar}, abstract = {This paper proposes a quasi-dense approach to 3D surface model acquisition from uncalibrated images. First, correspondence information and geometry are computed based on new quasi-dense point features that are resampled subpixel points from a disparity map. The quasi-dense approach gives more robust and accurate geometry estimations than the standard sparse approach. The robustness is measured as the success rate of full automatic geometry estimation with all involved parameters fixed. The accuracy is measured by a fast gauge-free uncertainty estimation algorithm. The quasi-dense approach also works for more largely separated images than the sparse approach, therefore, it requires fewer images for modeling. More importantly, the quasidense approach delivers a high density of reconstructed 3D points on which a surface representation can be reconstructed. This fills the gap of insufficiency of the sparse approach for surface reconstruction, essential for modeling and visualization applications. Second, surface reconstruction methods from the given quasi-dense geometry are also developed. The algorithm optimizes new unified functionals integrating both 3D quasi-dense points and 2D image information, including silhouettes. Combining both 3D data and 2D images is more robust than the existing methods using only 2D information or only 3D data. An efficient bounded regularization method is proposed to implement the surface evolution by level-set methods. Its properties are discussed and proven for some cases. As a whole, a complete automatic and practical system of 3D modeling from raw images captured by hand-held cameras to surface representation is proposed. Extensive experiments demonstrate the superior performance of the quasi-dense approach with respect to the standard sparse approach in robustness, accuracy, and applicability.}, keywords = {Algorithms, Animals, Artificial Intelligence, Arvicolinae, Automated, Bacteriophage mu, Biological, Calibration, Cluster Analysis, Comparative Study, Computer Simulation, Computer-Assisted, DNA Transposable Elements, Diastema, Electron, Energy-Filtering Transmission Electron, Epithelium, Gestational Age, Histocytochemistry, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Information Storage and Retrieval, Kidney, Microscopy, Models, Molar, Non-U.S. Gov't, Odontogenesis, Pattern Recognition, Photogrammetry, Protein Structure, Research Support, Scanning Transmission, Signal Processing, Spleen, Statistical, Subtraction Technique, Tertiary, Three-Dimensional, Tooth Germ, Transposases, Visible Human Project, 15747796}, owner = {Administrator}, pmid = {15747796}, timestamp = {2006.04.20}, } @ARTICLE{Li2004, author = {Li, Y.F.; Lu, R.S.;}, title = {Uncalibrated Euclidean 3-D reconstruction using an active vision system}, journal = {Robotics and Automation, IEEE Transactions}, year = {2004}, volume = {20}, pages = {15 - 25}, abstract = {Uncalibrated reconstruction of a scene is desired in many practical applications of computer vision. However, using a single camera with unconstrained motion and unknown parameters, a true Euclidean three-dimensional (3-D) model of the scene cannot be reconstructed. In this paper, we present a method for true Euclidean 3-D reconstruction using an active vision system consisting of a pattern projector and a camera. When the intrinsic and extrinsic parameters of the camera are changed during the reconstruction, they can be self-calibrated and the real 3-D model of the scene can then be reconstructed. The parameters of the projector are precalibrated and are kept constant during the reconstruction process. This allows the configuration of the vision system to be varied during a reconstruction task, which increases its self-adaptability to the environment or scene structure in which it is to work.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Lu2006, author = {Xiaoguang Lu and Anil K Jain and Dirk Colbry}, title = {{M}atching 2.5{D} face scans to 3{D} models.}, journal = {IEEE Trans Pattern Anal Mach Intell}, year = {2006}, volume = {28}, pages = {31--43}, number = {1}, month = {Jan}, abstract = {The performance of face recognition systems that use two-dimensional images depends on factors such as lighting and subject's pose. We are developing a face recognition system that utilizes three-dimensional shape information to make the system more robust to arbitrary pose and lighting. For each subject, a 3D face model is constructed by integrating several 2.5D face scans which are captured from different views. 2.5D is a simplified 3D (x, y, z) surface representation that contains at most one depth value (z direction) for every point in the (x, y) plane. Two different modalities provided by the facial scan, namely, shape and texture, are utilized and integrated for face matching. The recognition engine consists of two components, surface matching and appearance-based matching. The surface matching component is based on a modified Iterative Closest Point (ICP) algorithm. The candidate list from the gallery used for appearance matching is dynamically generated based on the output of the surface matching component, which reduces the complexity of the appearance-based matching stage. Three-dimensional models in the gallery are used to synthesize new appearance samples with pose and illumination variations and the synthesized face images are used in discriminant subspace analysis. The weighted sum rule is applied to combine the scores given by the two matching components. Experimental results are given for matching a database of 200 3D face models with 598 2.5D independent test scans acquired under different pose and some lighting and expression changes. These results show the feasibility of the proposed matching scheme.}, keywords = {Adult, Algorithms, Amoxicillin-Potassium Clavulanate Combination, Angle Class III, Animals, Anti-Bacterial Agents, Anti-Inflammatory Agents, Antibiotic Prophylaxis, Artifacts, Artificial Intelligence, Automated, Autoradiography, Biometry, Calibration, Carcinoma, Cephalometry, Cerebral Angiography, Cervical Vertebrae, Comparative Study, Computer-Aided Design, Computer-Assisted, Dexamethasone, Edema, English Abstract, Experimental, Face, Female, Fluorodeoxyglucose F18, Follow-Up Studies, Forensic Anthropology, Heterotopic, Humans, Image Interpretation, Imaging, Inbred C57BL, Intracranial Aneurysm, Lasers, Lewis Lung, Liver Neoplasms, Longitudinal Studies, Lung Neoplasms, Male, Malocclusion, Mandible, Maxilla, Mice, Middle Aged, Neoplasm Metastasis, Non-P.H.S., Ossification, Pattern Recognition, Phantoms, Photogrammetry, Photography, Positron-Emission Tomography, Postoperative Complications, Premedication, Prospective Studies, Radiation Dosage, Reproducibility of Results, Research Support, Sensitivity and Specificity, Spondylitis, Subtraction Technique, Surgical Instruments, Three-Dimensional, Tissue Distribution, Titanium, Tomography, Tomography Scanners, U.S. Gov't, Ultrasonography, United States, X-Ray Computed, 16402617}, owner = {Administrator}, pmid = {16402617}, timestamp = {2006.04.20}, } @MISC{M.Pollefeys2001, author = {M.Pollefeys,}, title = {Obtaining 3D Models with a Handheld Camera}, howpublished = {Siggraph Course, ACM,2001, Course notes CD-ROM;}, year = {2001}, abstract = {Modeling of 3D objects from image sequences is a challenging problem and has been a research topic for many years. Important theoretical and algorithmic results were achieved that allow to extract even complex 3D scene models from images. One recent effort has been to reduce the amount of calibration and to avoid restrictions on the camera motion. In this contribution an approach is described which achieves this goal by combining state-of-the-art algorithms for uncalibrated projective reconstruction, self-calibration and dense correspondence matching.}, owner = {Administrator}, timestamp = {2006.04.19}, url = {http://www.cs.unc.edu/~marc/tutorial/}, } @ARTICLE{Motai2004, author = {Motai, Y.; Kak, A.;}, title = {An interactive framework for acquiring vision models of 3-D objects from 2-D images}, journal = {Systems, Man and Cybernetics, Part B, IEEE Transactions}, year = {2004}, volume = {34}, pages = {566 - 578}, abstract = {This paper presents a human-computer interaction (HCI) framework for building vision models of three-dimensional (3-D) objects from their two-dimensional (2-D) images. Our framework is based on two guiding principles of HCI: 1) provide the human with as much visual assistance as possible to help the human make a correct input; and 2) verify each input provided by the human for its consistency with the inputs previously provided. For example, when stereo correspondence information is elicited from a human, his/her job is facilitated by superimposing epipolar lines on the images. Although that reduces the possibility of error in the human marked correspondences, such errors are not entirely eliminated because there can be multiple candidate points close together for complex objects. For another example, when pose-to-pose correspondence is sought from a human, his/her job is made easier by allowing the human to rotate the partial model constructed in the previous pose in relation to the partial model for the current pose. While this facility reduces the incidence of human-supplied pose-to-pose correspondence errors, such errors cannot be eliminated entirely because of confusion created when multiple candidate features exist close together. Each input provided by the human is therefore checked against the previous inputs by invoking situation-specific constraints. Different types of constraints (and different human-computer interaction protocols) are needed for the extraction of polygonal features and for the extraction of curved features. We will show results on both polygonal objects and object containing curved features.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Nau2005, author = {Thomas Nau and Yan Chevalier and Nicola Hagemeister and Nicolas Duval and Jacques A deGuise}, title = {3{D} kinematic in-vitro comparison of posterolateral corner reconstruction techniques in a combined injury model.}, journal = {Knee Surg Sports Traumatol Arthrosc}, year = {2005}, volume = {13}, pages = {572--580}, number = {7}, month = {Oct}, abstract = {With the variable injury pattern to the posterolateral structures (PLS) of the knee, a number of reconstructive procedures have been introduced. It was the aim of the present study to evaluate the resulting 3D kinematics following three different surgical techniques of reconstruction in a combined posterior cruciate ligament (PCL)/PLS injury model. In nine human cadaveric knees, 3D kinematics were recorded during the path of flexion-extension using a computer based custom made 6-degree-of-freedom (DOF) testing apparatus. Additional laxity tests were conducted at 30 and 90 degrees of flexion. Testing was performed before and after cutting the PLS and PCL, followed by PCL reconstruction alone. Reconstructing the posterolateral corner, three surgical techniques were compared: (a) the posterolateral corner sling procedure (PLCS), (b) the biceps tenodesis (BT), and (c) a bone patellar-tendon bone (BTB) allograft reconstruction. Posterior as well as rotational laxity were significantly increased after PCL/PLS transection at 30 and 90 degrees of flexion. Isolated PCL reconstruction resulted in a remaining external rotational deficiency for both tested flexion angles. Additional PLS reconstruction closely restored external rotation as well as posterior translation to intact values by all tested procedures. Compared to the intact knee, dynamic testing revealed a significant internal tibial rotation for (b) BT (mean=3.9 degrees, p=0.043) and for (c) BTB allograft (mean=4.3 degrees, p=0.012). (a) The PLCS demonstrated a tendency to internal tibial rotation between 0 and 60 degrees of flexion (mean=2.2 degrees, p=0.079). Varus/valgus rotation as well as anterior/posterior translation did not show significant differences for any of the tested techniques. The present study shows that despite satisfying results in static laxity testing, pathological 3D knee kinematics were not restored to normal, demonstrated by a nonphysiological internal tibial rotation during the path of flexion-extension.}, doi = {10.1007/s00167-004-0586-5}, keywords = {Adult, Aged, Algorithms, Animals, Articular, Artificial Intelligence, Arvicolinae, Automated, Autoradiography, Bacteriophage mu, Biological, Biological Markers, Biomechanics, Biotin, Bone Plates, Bone Transplantation, Brain, Calcium-Binding Protein, Calibration, Carcinoma, Cervical Vertebrae, Cluster Analysis, Comparative Study, Compressive Strength, Computer Simulation, Computer-Assisted, Confocal, Coronary Vessels, Cryoelectron Microscopy, Cysteine Endopeptidases, DNA Transposable Elements, Deafness, Dendrites, Dextrans, Diagnosis, Diastema, Dimerization, Diskectomy, Electron, Energy-Filtering Transmission Electron, Entorhinal Cortex, Epithelium, Equipment Failure Analysis, Extramural, Female, Finite Element Analysis, Fluorescent Antibody Technique, Fluorescent Dyes, Fluorodeoxyglucose F18, Gestational Age, Glucose, Hepatocellular, Hippocampus, Histocytochemistry, Humans, Image Cytometry, Image Enhancement, Image Interpretation, Image Processing, Imaging, In Vitro, Indirect, Information Storage and Retrieval, Interneurons, Intervertebral Disk, Kidney, Knee Injuries, Knee Joint, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Male, Mechanical, Mice, Microscopy, Middle Aged, Models, Molar, Molecular, Movement, N.I.H., Nerve Fibers, Neural Pathways, Neurological, Non-U.S. Gov't, Nude, Odontogenesis, Orthopedics, P.H.S., Para-Articular, Parahippocampal Gyrus, Parvalbumins, Pattern Recognition, Phosphorylase Kinase, Photogrammetry, Plants, Pliability, Polyethylenes, Posterior Cruciate Ligament, Potyvirus, Presynaptic Terminals, Prostheses and Implants, Prosthesis Design, Protein Structure, Rabbits, Radiopharmaceuticals, Range of Motion, Rats, Reconstructive Surgical Proce, Reconstructive Surgical Procedures, Research Support, Respiration, Scanning Transmission, Signal Processing, Skin Neoplasms, Spleen, Staining and Labeling, Statistical, Stress, Subtraction Technique, Tendons, Tensile Strength, Tertiary, Therapy, Three-Dimensional, Tibia, Time Factors, Tooth Germ, Transposases, Treatment Outcome, U.S. Gov't, Ultracentrifugation, Viral Proteins, Visible Human Project, Vitamin D-Dependent, Weight-Bearing, Wistar, X-Rays, dures, 15703964}, owner = {Administrator}, pmid = {15703964}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1007/s00167-004-0586-5}, } @CONFERENCE{nebel01generation, author = {Jean-Christophe Nebel}, title = {Generation of True 3D Films}, booktitle = {International Conference on Virtual Storytelling}, year = {2001}, pages = {10-19}, abstract = {We de ne a true 3D lm as a lm that can be viewed from any point in space. In order to generate true 3D lms, the 3D-MATIC Research Laboratory of the University of Glasgow has been developing a capture 3D studio based on photogrammetry technology. The idea is simply to generate 25 photo-realistic 3D models of a scene per second of lm. After the presentation of the state of the art in the domain, the core technology of our dynamic 3D scanner is detailed. Finally rst results, based on a 12 camera..}, pdf = {http://citeseer.ist.psu.edu/rd/98519713%2C481551%2C1%2C0.25%2CDownload/http://citeseer.ist.psu.edu/cache/papers/cs/23204/http:zSzzSzwww.dcs.gla.ac.ukzSz%7EjczSzPaperszSzPSformatzSzAvignon01.pdf/nebel01generation.pdf}, url = {http://citeseer.ist.psu.edu/nebel01generation.html}, } @CONFERENCE{, author = {P. Fong, F. Buron}, title = {High-Resolution Three-Dimensional Sensing of Fast Deforming Objects}, booktitle = {IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS)}, year = {2005}, abstract = {In applications like motion capture, high speed collision testing and robotic manipulation of deformable objects there is a critical need for capturing the 3D geometry of fast moving and/or deforming objects. Although there exist many 3D sensing techniques, most cannot deal with dynamic scenes (e.g., laser scanning). Others, like stereovision, require that object surfaces be appropriately textured. Few, if any, build highresolution 3D models of dynamic scenes. This paper presents a technique to compute high-resolution range maps from single images of moving and deforming objects. This method is based on observing the deformation of a projected light pattern that combines a set of parallel colored stripes and a perpendicular set of sinusoidal intensity stripes. While the colored stripes allow the sensor to compute absolute depths at coarse resolution, the sinusoidal intensity stripes give dense relative depths. This twofold pattern makes it possible to extract a high-resolution range map from each image in a video sequence. The sensor has been implemented and tested on several deforming objects.}, owner = {Administrator}, pdf = {C:\Documents and Settings\Administrator\Desktop\Seminario\biblio\3dcampaper_iros.pdf}, timestamp = {2006.04.27}, } @ARTICLE{Pizarro2004, author = {Pizarro, O.; Eustice, R.; Singh, H.;}, title = {Large area 3D reconstructions from underwater surveys}, journal = {OCEANS '04. MTS/IEEE TECHNO-OCEAN '04}, year = {2004}, volume = {2}, pages = {678 - 687}, abstract = {Robotic underwater vehicles can perform vast optical surveys of the ocean floor. Scientists value these surveys since optical images offer high levels of information and are easily interpreted by humans. Unfortunately the coverage of a single image is limited by absorption and backscatter while what is needed is an overall view of the survey area. Recent work on underwater mosaics assume planar scenes and are applicable only to situations without much relief. We present a complete and validated system for processing optical images acquired from an underwater robotic vehicle to form a 3D reconstruction of the ocean floor. Our approach is designed for the most general conditions of wide-baseline imagery (low overlap and presence of significant 3D structure) and scales to hundreds of images. We only assume a calibrated camera system and a vehicle with uncertain and possibly drifting pose information (e.g. a compass, depth sensor and a Doppler velocity log). Our approach is based on a combination of techniques from computer vision, photogrammetry and robotics. We use a local to global approach to structure from motion, aided by the navigation sensors on the vehicle to generate 3D submaps. These submaps are then placed in a common reference frame that is refined by matching overlapping submaps. The final stage of processing is a bundle adjustment that provides the 3D structure, camera poses and uncertainty estimates in a consistent reference frame. We present results with ground-truth for structure as well as results from an oceanographic survey over a coral reef covering an area of approximately one hundred square meters.}, owner = {Administrator}, timestamp = {2006.04.19}, } @MISC{pollefeys-capture, author = {Marc Pollefeys and Luc Van Gool and Maarten Vergauwen and Kurt Cornelis and Frank Verbiest and Jan Tops}, title = {3D Capture of Archaeology and Architecture with a Hand-Held Camera}, abstract = {In this paper we present an automated processing pipeline that, from a sequence of images, reconstructs a 3D model. The approach is particularly flexible as it can deal with a hand-held camera without the need for an a priori calibration or explicit knowledge about the recorded scene. In a fist stage features are extracted and tracked throughout the sequence. Using robust statistics and multiple view relations the 3D structure of the observed features and the camera motion and calibration are computed. In a second stage stereo matching is used to obtain a detailed estimate of the geometry of the observed scene. The presented approach integrates state-of-the-art algorithms developed in computer vision, computer graphics and photogrammetry. Due to its flexibility during image acqusition, this approach is particularly well suited for application in the field of archaeology and architectural conservation.}, url = {citeseer.ist.psu.edu/722168.html}, } @MISC{pollefeys-acquisition, author = {Marc Pollefeys and Maarten Vergauwen and Kurt Cornelis and Frank Verbiest and Joris Schouteden and Jan Tops and Luc Van Gool}, title = {3D Acquisition of Archaeological Heritage from Images}, abstract = {The performance of face recognition systems that use two-dimensional images depends on factors such as lighting and subject's pose. We are developing a face recognition system that utilizes three-dimensional shape information to make the system more robust to arbitrary pose and lighting. For each subject, a 3D face model is constructed by integrating several 2.5D face scans which are captured from different views. 2.5D is a simplified 3D (x,y,z) surface representation that contains at most one depth value (z direction) for every point in the (x, y) plane. Two different modalities provided by the facial scan, namely, shape and texture, are utilized and integrated for face matching. The recognition engine consists of two components, surface matching and appearance-based matching. The surface matching component is based on a modified iterative closest point (ICP) algorithm. The candidate list from the gallery used for appearance matching is dynamically generated based on the output of the surface matching component, which reduces the complexity of the appearance-based matching stage. Three-dimensional models in the gallery are used to synthesize new appearance samples with pose and illumination variations and the synthesized face images are used in discriminant subspace analysis. The weighted sum rule is applied to combine the scores given by the two matching components. Experimental results are given for matching a database of 200 3D face models with 598 2.5D independent test scans acquired under different pose and some lighting and expression changes. These results show the feasibility of the proposed matching scheme.}, url = {citeseer.ist.psu.edu/717078.html}, } @ARTICLE{Poon2006, author = {Tony C Poon and Robert N Rohling}, title = {{T}hree-dimensional extended field-of-view ultrasound.}, journal = {Ultrasound Med Biol}, year = {2006}, volume = {32}, pages = {357--369}, number = {3}, month = {Mar}, abstract = {Three-dimensional (3-D) extended field-of-view ultrasound creates a mosaic view from a set of volumes acquired from a dedicated 3-D ultrasound machine combined with a position tracker. A simple compounding technique can be used to combine the volumes together using only the position measurements, but some misalignment remains. Two different registration methods were developed to correct these errors in the overlapping regions. The first method divides the overlap into smaller blocks and warps the blocks to best align the features. The second method is similar, but uses rigid body registration of the blocks. Experiments in vitro and in vivo showed that block-based registration with warping produced the most reproducible results and the greatest increase in similarity among the overlapping regions. It also produced the best reconstruction accuracy, with a mean distance error of 0.4 mm measured across 101.78 mm in a phantom, representing 0.4\% error. (E-mail: ).}, doi = {6/j.ultrasmedbio.2005.11.003}, keywords = {16530094}, owner = {Administrator}, pii = {S0301-5629(05)00436-9}, pmid = {16530094}, timestamp = {2006.04.20}, url = {http://dx.doi.org/6/j.ultrasmedbio.2005.11.003}, } @MISC{poulin03interactive, author = {P. POULIN and M. STAMMINGER and F. DURANLEAU and M. FRASSON and G. DRETTAKIS}, title = {Interactive point-based modeling of complex objects from images}, year = {2003}, abstract = {Modeling complex realistic objects is a difficult and time consuming process. Nevertheless, with improvements in rendering speed and quality, more and more applications require such realistic complex 3D objects. We present an interactive modeling system that extracts 3D objects from photographs. Our key contribution lies in the tight integration of a point-based representation and user interactivity, by introducing a set of interactive tools to guide reconstruction. 3D color points are a flexible and effective representation for very complex objects; adding, moving, or removing points is fast and simple, facilitating easy improvement of object quality. Because images and depths maps can be very rapidly generated from points, testing validity of point projections in several images is efficient and simple. These properties allow our system to rapidly generate a first approximate model, and allow the user to continuously and interactively guide the generation of points, both locally and globally. A set of interactive tools and optimizations are introduced to help the user improve the extracted objects.}, text = {POULIN P., STAMMINGER M., DURANLEAU F., FRASSON M.-C., DRETTAKIS G.: Interactive point-based modeling of complex objects from images. In Graphics Interface 2003 (June 2003), pp. 11--20. 2}, url = {citeseer.ist.psu.edu/poulin03interactive.html}, } @CONFERENCE{Riaz2004, author = {Riaz, F.; Munawar, A.; Mehboob, A.; Baig, W.;}, title = {A new algorithm for reconstruction of 3-D coordinates from a 2-D image using a projected pattern}, booktitle = {Multitopic Conference, 2004. Proceedings of INMIC 2004. 8th International 24-26 Dec. 2004 Page(s):579 - 583}, year = {2004}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Robinette2006, author = {Kathleen M Robinette and Hein A M Daanen}, title = {{P}recision of the {CAESAR} scan-extracted measurements.}, journal = {Appl Ergon}, year = {2006}, volume = {37}, pages = {259--265}, number = {3}, month = {May}, abstract = {Three-dimensional (3D) body scanners are increasingly used to derive 1D body dimensions from 3D whole body scans for instance, as input for clothing grading systems to make made-to-measure clothing or for width and depth dimensions of a seated workstation. In this study, the precision of the scanner-derived 1D dimensions from the CAESAR survey, a multinational anthropometric survey, was investigated. Two combinations of scanning teams with 3D whole body scanners were compared, one called the US Team and the other the Dutch Team. Twenty subjects were measured three times by one scanner and one team, and three times by the other combination. The subjects were marked prior to scanning using small dots, and the linear distances between the dots were calculated after processing the scans. The mean absolute difference (MAD) of the repetitions was calculated and this was compared to reported acceptable errors in manual measurements from the US Army's ANSUR survey when similar measurements were available. In addition, the coefficient of variation (CV) was calculated for all measurements. The results indicate that the CAESAR scan-extracted measurements are highly reproducible; for most measures the MAD is less than 5mm. In addition, more than 93\% of the MAD values for CAESAR are significantly smaller than the ANSUR survey acceptable errors. Therefore, it is concluded that the type of scan-extracted measures used in CAESAR are as good as or better than comparable manual measurements. Scan-extracted measurements that do not use markers or are not straight-line distances are not represented here and additional studies would be needed to verify their precision.}, doi = {10.1016/j.apergo.2005.07.009}, keywords = {80 and over, Adipose Tissue, Adult, Aged, Alcohol Withdrawal Seizure, Alcoholism, Algorithms, Anatomic, Angiography, Ankle Joint, Anterior Cerebral Artery, Biological, Biomechanics, Breast Neoplasms, Carcinoma, Comparative Study, Computer Simulation, Computer-Assisted, Conformal, Corpus Callosum, Digital Subtraction, Dose Fractionation, Drug Administration Schedule, Echo-Planar Imaging, English Abstract, Extramural, Feasibility Studies, Female, Forecasting, Health Care, Humans, Hypertension, Hypertensive, Image Enhancement, Image Interpretation, Image Processing, Imaging, Injections, Intracranial Aneurysm, Intracranial Hemorrhage, Kidney Neoplasms, Lung Neoplasms, Lymph Nodes, Lymphatic Metas, Magnetic Resonance Angiography, Male, Mediastinum, Middle Aged, Models, Movement, Multivariate Analysis, Muscle, N.I.H., Neoplasm Staging, Non-Small-Cell Lung, Non-U.S. Gov't, P.H.S., Phonetics, Positron-Emission Tomography, Principal Component Analysis, Probability, Prostate, Prostatic Neoplasms, Quality Assurance, ROC Curve, Radiopharmaceuticals, Radiotherapy, Radiotherapy Planning, Reference Standards, Research Support, Skeletal, Software Validation, Sound Spectrography, Three-Dimensional, Tomography, Tongue, Transducers, Treatment Outcome, U.S. Gov't, Ultrasonography, User-Computer Interface, Water, Whole Body Imaging, Whole-Body Counting, X-Ray Computed, s, tasis, 16202970}, owner = {Administrator}, pii = {S0003-6870(05)00121-3}, pmid = {16202970}, timestamp = {2006.04.20}, url = {http://dx.doi.org/10.1016/j.apergo.2005.07.009}, } @ARTICLE{Roh2004, author = {Roh, Y.J.; Cho, H.S.;}, title = {Implementation of uniform and simultaneous ART for 3-D reconstruction in an X-ray imaging system}, journal = {Vision, Image and Signal Processing, IEE Proceedings}, year = {2004}, volume = {151}, pages = {360 - 368}, abstract = {The authors propose a 3-D volume reconstruction method using X-ray images with a calibration method to implement it in an X-ray imaging system. Previously the authors have proposed an advanced 3-D reconstruction algorithm based on an algebraic reconstruction technique (ART), called a uniform and simultaneous ART (USART). In practice, however, there are two main issues in implementing it in a realised X-ray imaging system. The first one is the huge computation time and memory required in achieving 3-D volume, which is a common limitation in most ART methods. The second issue is the system calibration for determining the geometry of the X-ray imaging conditions needed for the ART method. These two critical problems are addressed. A fast computing model of USART is proposed, where spherical voxel elements are employed in computation to reduce the computation time and memory. Then, a calibration method is proposed to identify the X-ray imaging geometry based on a cone beam projection model. For this purpose, a set of X-ray images of a reference grid pattern is used and the X-ray source positions are determined from the analysis of the image features, the centres of the grid points in the X-ray images. The validity of the proposed 3-D reconstruction method is investigated using a series of experiments.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Rohlfing2005, author = {Rohlfing, T.; Denzler, J.; Grassl, C.; Russakoff, D.B.; Maurer, C.R., Jr.;}, title = {Markerless real-time 3-D target region tracking by motion backprojection from projection images}, journal = {Medical Imaging, IEEE Transactions}, year = {2005}, volume = {24}, pages = {1455 - 1468}, abstract = {Accurate and fast localization of a predefined target region inside the patient is an important component of many image-guided therapy procedures. This problem is commonly solved by registration of intraoperative 2-D projection images to 3-D preoperative images. If the patient is not fixed during the intervention, the 2-D image acquisition is repeated several times during the procedure, and the registration problem can be cast instead as a 3-D tracking problem. To solve the 3-D problem, we propose in this paper to apply 2-D region tracking to first recover the components of the transformation that are in-plane to the projections. The 2-D motion estimates of all projections are backprojected into 3-D space, where they are then combined into a consistent estimate of the 3-D motion. We compare this method to intensity-based 2-D to 3-D registration and a combination of 2-D motion backprojection followed by a 2-D to 3-D registration stage. Using clinical data with a fiducial marker-based gold-standard transformation, we show that our method is capable of accurately tracking vertebral targets in 3-D from 2-D motion measured in X-ray projection images. Using a standard tracking algorithm (hyperplane tracking), tracking is achieved at video frame rates but fails relatively often (32% of all frames tracked with target registration error (TRE) better than 1.2 mm, 82% of all frames tracked with TRE better than 2.4 mm). With intensity-based 2-D to 2-D image registration using normalized mutual information (NMI) and pattern intensity (PI), accuracy and robustness are substantially improved. NMI tracked 82% of all frames in our data with TRE better than 1.2 mm and 96% of all frames with TRE better than 2.4 mm. This comes at the cost of a reduced frame rate, 1.7 s average processing time per frame and projection device. Results using PI were slightly more accurate, but required on average 5.4 s time per frame. These results are still substantially faster than 2-D to 3-D registration. We conclude that motion backprojection from 2-D motion tracking is an accurate and efficient method for tracking 3-D target motion, but tracking 2-D motion accurately and robustly remains a challenge.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Rollot2004, author = {Y. Rollot and E. Lecuyer and H. Chateau and N. Crevier-Denoix}, title = {{D}evelopment of a 3{D} model of the equine distal forelimb and of a {GRF} shoe for noninvasive determination of in vivo tendon and ligament loads and strains.}, journal = {Equine Vet J}, year = {2004}, volume = {36}, pages = {677--682}, number = {8}, month = {Dec}, abstract = {REASONS FOR PERFORMING STUDY: As critical locomotion events (e.g. high-speed and impacts during racing, jump landing) may contribute to tendinopathies, in vivo recording of gaits kinematic and dynamic parameters is essential for 3D reconstruction and analysis. OBJECTIVE: To propose a 3D model of the forelimb and a ground reaction force recording shoe (GRF-S) for noninvasively quantifying tendon and ligament loads and strains. METHODS: Bony segments trajectories of forelimbs placed under a power press were recorded using triads of ultrasonic kinematic markers linked to the bones. Compression cycles (from 500-6000 N) were applied for different hoof orientations. Locations of tendon and ligament insertions were recorded with regard to the triads. The GRF-S recorded GRF over the hoof wall and used four 3-axis force sensors sandwiched between a support shoe and the shoe to be tested. RESULTS: Validation of the model by comparing calculated and measured superficial digital flexor tendon strains, and evaluation of the role of proximal interphalangeal joint in straight sesamoidean ligament and oblique sesamoidean ligament strains, were successfully achieved. Objective comparisons of the 3 components of GRF over the hoof for soft and hard grounds could be recorded, where the s.d. of GRF norm was more important on hard ground at walk and trot. CONCLUSIONS: Soft grounds (sand and rubber) dissipate energy by lowering GRF amplitude and diminish bounces and vibrations at impact. At comparable speed, stance phase was longer on soft sand ground. POTENTIAL RELEVANCE: The conjugate use of the GRF-S and the numerical model would help to quantify and analyse ground/shoe combination on comfort, propulsion efficiency or lameness recovery.}, keywords = {Adult, Aged, Algorithms, Animals, Articular, Artifacts, Artificial Intelligence, Arvicolinae, Automated, Autoradiography, Bacteriophage mu, Basement Membrane, Bayes Theorem, Biol, Biological, Biological Markers, Biomechanics, Biotin, Bone Plates, Bone Transplantation, Brain, Calcium-Binding Protein, Calibration, Carcinoma, Cardiovascular, Cell Differentiation, Cells, Cervical Vertebrae, Cluster Analysis, Coculture Techniques, Comparative Study, Compressive Strength, Computer Simulation, Computer-Assisted, Confocal, Coronary Vessels, Cryoelectron Microscopy, Cultured, Cysteine Endopeptidases, DNA Transposable Elements, Deafness, Dendrites, Dermis, Dextrans, Diagnosis, Diastema, Dimerization, Diskectomy, Electroencephalography, Electron, Energy-Filtering Transmission Electron, Engineering, Entorhinal Cortex, Epidermis, Epithelium, Equipment Failure Analysis, Evoked Poten, Extracellular Matrix, Extracellular Matrix Proteins, Extramural, Female, Fibroblasts, Filtration, Finite Element Analysis, Floors and Floorcoverings, Fluorescent Antibody Technique, Fluorescent Dyes, Fluorodeoxyglucose F18, Forecasting, Forelimb, Gait, Gestational Age, Glucose, Hepatocellular, Hippocampus, Histocytochemistry, Horses, Humans, Image Cytometry, Image Enhancement, Image Interpretation, Image Processing, Imaging, In Vitro, Indirect, Information Storage and Retrieval, Integrins, Interneurons, Intervertebral Disk, Kidney, Knee Injuries, Knee Joint, Ligaments, Likelihood Functions, Locomotion, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Male, Mechanical, Mice, Microscopy, Middle Aged, Models, Molar, Molecular, Morphogenesis, Movement, Myocardium, N.I.H., Nerve Fibers, Neural Pathways, Neurofilament Proteins, Neurological, Non-P.H.S., Non-U.S. Gov't, Nude, Odontogenesis, Organ Culture Techniques, Orthopedics, P.H.S., Para-Articular, Parahippocampal Gyrus, Parvalbumins, Pattern Recognition, Permeability, Phosphorylase Kinase, Photogrammetry, Plants, Pliability, Polyethylenes, Porosity, Posterior Cruciate Ligament, Potyvirus, Presynaptic Terminals, Prostheses and Implants, Prosthesis Design, Protein Structure, Rabbits, Radiopharmaceuticals, Range of Motion, Rats, Reconstructive Surgical Proce, Reconstructive Surgical Procedures, Reproducibility of Results, Research Support, Respiration, Scanning Transmission, Sensitivity and Specificity, Shoes, Signal Processing, Sinoatrial Node, Skin Neoplasms, Somatosensory, Spleen, Staining and Labeling, Statistical, Stress, Subtraction Technique, Tendons, Tensile Strength, Tertiary, Theoretical, Therapy, Three-Dimensional, Tibia, Time Factors, Tissue Engineering, Toe Joint, Tooth Germ, Transposases, Treatment Outcome, U.S. Gov't, Ultracentrifugation, Viral Proteins, Visible Human Project, Vitamin D-Dependent, Water Pollutants, Weight-Bearing, Wistar, X-Rays, dures, ogical, tials, 15656495}, owner = {Administrator}, pmid = {15656495}, timestamp = {2006.04.20}, } @ARTICLE{Roy-Chowdhury2005, author = {Roy-Chowdhury, A.K.; Chellappa, R.;}, title = {Statistical bias in 3-D reconstruction from a monocular video}, journal = {Image Processing, IEEE Transactions}, year = {2005}, volume = {14}, pages = {1057 - 1062}, abstract = {The present state-of-the-art in computing the error statistics in three-dimensional (3-D) reconstruction from video concentrates on estimating the error covariance. A different source of error which has not received much attention is the fact that the reconstruction estimates are often significantly statistically biased. In this paper, we derive a precise expression for the bias in the depth estimate, based on the continuous (differentiable) version of structure from motion (SfM). Many SfM algorithms, or certain portions of them, can be posed in a linear least-squares (LS) framework Ax=b. Examples include initialization procedures for bundle adjustment or algorithms that alternately estimate depth and camera motion. It is a well-known fact that the LS estimate is biased if the system matrix A is noisy. In SfM, the matrix A contains point correspondences, which are always difficult to obtain precisely; thus, it is expected that the structure and motion estimates in such a formulation of the problem would be biased. Existing results on the minimum achievable variance of the SfM estimator are extended by deriving a generalized Cramer-Rao lower bound. A detailed analysis of the effect of various camera motion parameters on the bias is presented. We conclude by presenting the effect of bias compensation on reconstructing 3-D face models from rendered images.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Russakoff2005, author = {Russakoff, D.B.; Rohlfing, T.; Mori, K.; Rueckert, D.; Ho, A.; Adler, J.R., Jr.; Maurer, C.R., Jr.;}, title = {Fast generation of digitally reconstructed radiographs using attenuation fields with application to 2D-3D image registration}, journal = {Medical Imaging, IEEE Transactions}, year = {2005}, volume = {24}, pages = {1441 - 1454}, abstract = {Generation of digitally reconstructed radiographs (DRRs) is computationally expensive and is typically the rate-limiting step in the execution time of intensity-based two-dimensional to three-dimensional (2D-3D) registration algorithms. We address this computational issue by extending the technique of light field rendering from the computer graphics community. The extension of light fields, which we call attenuation fields (AFs), allows most of the DRR computation to be performed in a preprocessing step; after this precomputation step, DRRs can be generated substantially faster than with conventional ray casting. We derive expressions for the physical sizes of the two planes of an AF necessary to generate DRRs for a given X-ray camera geometry and all possible object motion within a specified range. Because an AF is a ray-based data structure, it is substantially more memory efficient than a huge table of precomputed DRRs because it eliminates the redundancy of replicated rays. Nonetheless, an AF can require substantial memory, which we address by compressing it using vector quantization. We compare DRRs generated using AFs (AF-DRRs) to those generated using ray casting (RC-DRRs) for a typical C-arm geometry and computed tomography images of several anatomic regions. They are quantitatively very similar: the median peak signal-to-noise ratio of AF-DRRs versus RC-DRRs is greater than 43 dB in all cases. We perform intensity-based 2D-3D registration using AF-DRRs and RC-DRRs and evaluate registration accuracy using gold-standard clinical spine image data from four patients. The registration accuracy and robustness of the two methods is virtually identical whereas the execution speed using AF-DRRs is an order of magnitude faster.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Schmid2005, author = {O. A. Schmid}, title = {{D}ynamic accuracy survey of the new "single plane--single frame 3-{D} calibration" technique for use in biomedical applications.}, journal = {Biomed Tech (Berl)}, year = {2005}, volume = {50}, pages = {38--44}, number = {3}, month = {Mar}, abstract = {This study tested the accuracy of a new 3-D calibration technique under dynamic situations. The technique was firstly introduced in 1998 for biomechanical human tests and calibrates 3-D volumes in an easy way. It revealed superior in static tests to others. In order to disclose dynamic accuracy two different tests were performed. With this technique it does not matter whether redundant information from multiple camera views is available or not. The mean error for distances measured at 0.018\% for redundant information and at 0.012\% for the non-redundant test in contrast to other procedures found in literature, which attain values of 0.09\% and 0.04\% respectively. The maximum error ranged there between 5.5\% and 17.9\%, whereas the presented data reached values of 0.33\% and 0.48\%. The more important angle error was at maximum 0.055\% (9 times less than the most accurate in literature) and nearly zero for the mean error value. The level of noise was the same in the test with redundancy and 7.4 times lower in the present study than other commercial available systems for non-redundant video information. The new procedure revealed as a stable and very accurate 3-D reconstruction technique for a variety of application not limited to biomedical applications.}, keywords = { Support, 80 and over, Adult, Aged, Algorithms, Angiography, Animals, Anthropometry, Artifici, Artificial Intelligence, Atomic Force, Automated, Basal Ganglia Hemorrhage, Biological, Bioprosthesis, Bloo, Blood Vessels, Brain, Brain Mapping, Calibration, Catheterization, Cell Culture Techniques, Cell Line, Cluster Analysis, Collagen, Comparative Study, Computer Simulation, Computer-Aided Design, Computer-Assisted, Craniofacial Abnormalities, Drug Combinations, Electron, Endothelial Cells, English Abstract, Extramural, Feasibility Studies, Female, Fluorodeoxyglucose F18, Fluoroscopy, Humans, Image Enhancement, Image Interpretation, Imaging, Inbred BALB C, Information Storage and Retrieval, Kinetics, Laminin, Male, Metabolic Clearance Rate, Mice, Microscopy, Microtomy, Middle Aged, Models, N.I.H., Neovascularization, Neurological, Non-P.H.S., Non-U.S. Gov't, Orbit, Organ Size, P.H.S., Pattern Recognition, Phantoms, Photography, Physiologic, Positr, Prosthesis Design, Proteoglycans, Radiographic Image Enhancement, Radiographic Image Interpretation, Radiopharmaceuticals, Rats, Reference Standards, Reproducibility , Reproducibility of Results, Research, Research Support, Retrospective Studies, Sensitivity and Specificity, Software, Spiral Computed, Statistical, Stem Cells, Surgery, Three-Dimensional, Tissue Distribution, Tissue Engineering, Tomography, Transmission, U.S. Gov't, User-Computer Interface, Video Recording, al Intelligence, d Vessel Prosthesis, of Results, on-Emission Tomography, 15832574}, owner = {Administrator}, pmid = {15832574}, timestamp = {2006.04.20}, } @ARTICLE{Schmidt2005, author = {Taly Gilat Schmidt and Rebecca Fahrig and Norbert J Pelc}, title = {{A} three-dimensional reconstruction algorithm for an inverse-geometry volumetric {CT} system.}, journal = {Med Phys}, year = {2005}, volume = {32}, pages = {3234--3245}, number = {11}, month = {Nov}, abstract = {An inverse-geometry volumetric computed tomography (IGCT) system has been proposed capable of rapidly acquiring sufficient data to reconstruct a thick volume in one circular scan. The system uses a large-area scanned source opposite a smaller detector. The source and detector have the same extent in the axial, or slice, direction, thus providing sufficient volumetric sampling and avoiding cone-beam artifacts. This paper describes a reconstruction algorithm for the IGCT system. The algorithm first rebins the acquired data into two-dimensional (2D) parallel-ray projections at multiple tilt and azimuthal angles, followed by a 3D filtered backprojection. The rebinning step is performed by gridding the data onto a Cartesian grid in a 4D projection space. We present a new method for correcting the gridding error caused by the finite and asymmetric sampling in the neighborhood of each output grid point in the projection space. The reconstruction algorithm was implemented and tested on simulated IGCT data. Results show that the gridding correction reduces the gridding errors to below one Hounsfield unit. With this correction, the reconstruction algorithm does not introduce significant artifacts or blurring when compared to images reconstructed from simulated 2D parallel-ray projections. We also present an investigation of the noise behavior of the method which verifies that the proposed reconstruction algorithm utilizes cross-plane rays as efficiently as in-plane rays and can provide noise comparable to an in-plane parallel-ray geometry for the same number of photons. Simulations of a resolution test pattern and the modulation transfer function demonstrate that the IGCT system, using the proposed algorithm, is capable of 0.4 mm isotropic resolution. The successful implementation of the reconstruction algorithm is an important step in establishing feasibility of the IGCT system.}, keywords = {80 and over, Adolescent, Adult, Aged, Algorithms, Artifacts, Comparative Study, Computer-Assisted, Echo-Planar Imaging, Extramural, Female, Humans, Image Processing, Imaging, Magnetic Resonance Imaging, Male, Melanoma, Middle Aged, Models, N.I.H., Non-U.S. Gov't, Observer Variation, Phantoms, Photons, Protons, Radiation, Radiographic Image Enhancement, Radiographic Image Interpretation, Radiotherapy Planning, Research Support, Scattering, Software, Statistical, Theoretical, Three-Dimensional, Time Factors, Tomography, Tumor Burden, Ultrasonics, Uveal Neoplasms, Water, X-Ray Computed, 16370414}, owner = {Administrator}, pmid = {16370414}, timestamp = {2006.04.20}, } @ARTICLE{Senin2006, author = {Nicola Senin and Roberto Groppetti and Luciano Garofano and Paolo Fratini and Michele Pierni}, title = {{T}hree-dimensional surface topography acquisition and analysis for firearm identification.}, journal = {J Forensic Sci}, year = {2006}, volume = {51}, pages = {282--295}, number = {2}, month = {Mar}, abstract = {In the last decade, computer-based systems for the comparison of microscopic firearms evidence have been the subject of considerable research work because of their expected capability of supporting the firearms examiner through the automated analysis of large amounts of evidence. The Integrated Ballistics Identification System, which is based on a two-dimensional representation of the specimen surface, has been widely adopted in forensic laboratories worldwide. More recently, some attempts to develop systems based on three-dimensional (3D) representations of the specimen surface have been made, both in the literature and as industrial products, such as BulletTRAX-3D, but fundamental limitations in achieving fully automated identification remain. This work analyzes the advantages and disadvantages of a 3D-based approach by proposing an approach and a prototype system for firearms evidence comparison that is based on the acquisition and analysis of the 3D surface topography of specimens, with particular reference to cartridge cases. The concept of 3D virtual comparison microscope is introduced, whose purpose is not to provide fully automated identification, but to show how the availability of 3D shape information can provide a whole new set of verification means, some of them being described and discussed in this work, specifically, visual enhancement tools and quantitative measurement of shape properties, for supporting, not replacing, the firearm examiner in reaching the final decision.}, doi = {10.1111/j.1556-4029.2006.00048.x}, keywords = {16566761}, owner = {Administrator}, pii = {JFO48}, pmid = {16566761}, timestamp = {2006.04.21}, url = {http://dx.doi.org/10.1111/j.1556-4029.2006.00048.x}, } @CONFERENCE{Silva2003a, author = {Silva, L.C.; Petraglia, A.; Petraglia, M.R.;}, title = {Stereo vision system for remote monitoring and 3-D reconstruction}, booktitle = {Signal Processing and Its Applications, 2003. Proceedings. Seventh International Symposium on Volume 1, 1-4 July 2003 Page(s):9 - 12 vol.1}, year = {2003}, abstract = {A three-dimensional vision system for inspection activities of installations and equipment by remotely operated vehicles is presented. A real-time vision system is used for the acquisition of stereo pairs of images which, after preprocessing, are submitted to a reconstruction procedure in order to obtain 3-D coordinates and to perform dimensioning of objects. A minimization procedure applied to a robust least-squares implementation of the camera system orientation is described. Experimental results are shown to verify the effectiveness of the proposed techniques.}, owner = {Administrator}, timestamp = {2006.04.19}, } @INPROCEEDINGS{slabaughsurvey, author = {G. Slabaugh and B. Culbertson and T. Malzbender and R. Schafer}, title = {A Survey of Methods for Volumetric Scene Reconstruction from Photographs}, pages = {81--100}, abstract = {Scene reconstruction, the task of generating a 3D model of a scene given multiple 2D photographs taken of the scene, is an old and difficult problem in computer vision. Since its introduction, scene reconstruction has found application in many fields, including robotics, virtual reality, and entertainment. Volumetric models are a natural choice for scene reconstruction. Three broad classes of volumetric reconstruction techniques have been developed based on geometric intersections, color...}, citeseerurl = {http://citeseer.ist.psu.edu/slabaugh01survey.html}, url = {citeseer.ist.psu.edu/slabaugh01survey.html}, } @BOOK{Soille.2003., title = {Morphological Image Analysis. 2nd edition}, publisher = {Springer-Verlag, Heidelberg}, year = {2003.}, author = {P. Soille.}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Tai-Peng2005, author = {Tai-Peng Tian, Stan Sclaroff}, title = {Handsignals Recognition From Video Using 3D Motion Capture Data}, year = {2005}, volume = {2}, abstract = {Hand signals are commonly used in applications such as giving instructions to a pilot for airplane takeoff or direction of a crane operator by a foreman on the ground. A new algorithm for recognizing hand signals from a single camera is proposed. Typically, tracked 2D feature positions of hand signals are matched to 2D training images. In contrast, our approach matches the 2D feature positions to an archive of 3D motion capture sequences. The method avoids explicit reconstruction of the 3D articulated motion from 2D image features. Instead, the matching between the 2D and 3D sequence is done by backprojecting the 3D motion capture data onto 2D. Experiments demonstrate the effectiveness of the approach in an example application: recognizing six classes of basketball referee hand signals in video.}, journal = {IEEE Workshop on Motion and Video Computing (WACV/MOTION'05)}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Tognola2003, author = {Tognola, G.; Parazzini, M.; Ravazzani, P.; Grandori, F.; Svelto, C.;}, title = {3-D acquisition and quantitative measurements of anatomical parts by optical scanning and image reconstruction from unorganized range data}, journal = {Instrumentation and Measurement, IEEE Transactions}, year = {2003}, volume = {52}, pages = {1665 - 1673}, abstract = {A simple method for direct acquisition of a cloud of points from an object surface is presented together with a novel surface reconstruction algorithm used to obtain an explicit three-dimensional (3-D) model for the measured object. This technique is aimed at relatively accurate but simple and reliable 3-D reconstruction of anatomical parts for biomedical applications. A prototype 3-D scanning system is presented: the physical acquisition system and the image reconstruction algorithm are described. Measurements on objects of well-known geometrical features and dimensions are performed in order to assess accuracy and repeatability levels of this 3-D acquisition system. Robustness to noise of the proposed reconstruction algorithm is determined by simulation with synthetic test surfaces. Finally, the first measurements (acquisition + reconstruction) of closed surfaces from human organs are reported.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Tomazevic2005, author = {Tomazevic, D.; Likar, B.; Pernus, F.;}, title = {3-D/2-D registration by integrating 2-D information in 3-D}, journal = {Medical Imaging, IEEE Transactions}, year = {2005}, volume = {25}, pages = {17 - 27}, abstract = {In image-guided therapy, high-quality preoperative images serve for planning and simulation, and intraoperatively as "background", onto which models of surgical instruments or radiation beams are projected. The link between a preoperative image and intraoperative physical space of the patient is established by image-to-patient registration. In this paper, we present a novel 3-D/2-D registration method. First, a 3-D image is reconstructed from a few 2-D X-ray images and next, the preoperative 3-D image is brought into the best possible spatial correspondence with the reconstructed image by optimizing a similarity measure (SM). Because the quality of the reconstructed image is generally low, we introduce a novel SM, which is able to cope with low image quality as well as with different imaging modalities. The novel 3-D/2-D registration method has been evaluated and compared to the gradient-based method (GBM) using standardized evaluation methodology and publicly available 3-D computed tomography (CT), 3-D rotational X-ray (3DRX), and magnetic resonance (MR) and 2-D X-ray images of two spine phantoms, for which gold standard registrations were known. For each of the 3DRX, CT, or MR images and each set of X-ray images, 1600 registrations were performed from starting positions, defined as the mean target registration error (mTRE), randomly generated and uniformly distributed in the interval of 0-20 mm around the gold standard. The capture range was defined as the distance from gold standard for which the final TRE was less than 2 mm in at least 95% of all cases. In terms of success rate, as the function of initial misalignment and capture range the proposed method outperformed the GBM. TREs of the novel method and the GBM were approximately the same. For the registration of 3DRX and CT images to X-ray images as few as 2-3 X-ray views were sufficient to obtain approximately 0.4 mm TREs, 7-9 mm capture range, and 80%-90% of successful registrations. To obtain similar results for MR to X-ray registrations, an image, reconstructed from at least 11 X-ray images was required. Reconstructions from more than 11 images had no effect on the registration results.}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Vicar2004, author = {Vicar, D.M.; Ford, S.; Borland, E.; Rixon, R.; Patterson, J.; Cockshott, P.}, title = {3D performance capture for facial animation}, booktitle = {3D Data Processing, Visualization and Transmission, 2004. 3DPVT 2004. Proceedings. 2nd International Symposium on 6-9 Sept. 2004}, year = {2004}, abstract = {This work describes how a photogrammetry based 3D capture system can be used as an input device for animation. The 3D Dynamic Capture System is used to capture the motion of a human face, which is extracted from a sequence of 3D models captured at TV frame rate. Initially the positions of a set of landmarks on the face are extracted. These landmarks are then used to provide motion data in two different ways. First, a high level description of the movements is extracted, and these can be used as input to a procedural animation package (i.e. CreaToon). Second the landmarks can be used as registration points for a conformation process where the model to be animated is modified to match the captured model. This approach gives a new sequence of models, which have the structure of the drawn model but the movement of the captured sequence.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Virador48, author = {Virador, P.R.G.; Moses, W.W.; Huesman, R.H.; Qi, J.;}, title = {3-D reconstruction in PET cameras with irregular sampling and depth of interaction}, journal = {Nuclear Science, IEEE Transactions}, year = {2001}, volume = {48}, pages = {1524 - 1529}, abstract = {We present 3D reconstruction algorithms that address fully 3D tomographic reconstruction for a septa-less, stationary, and rectangular camera. The field of view (FOV) encompasses the entire volume enclosed by detector modules capable of measuring depth of interaction (DOI). The Filtered Backprojection based algorithms incorporate DOI, accommodate irregular sampling, and minimize interpolation in the data by defining lines of response between the measured interaction points. We use fixed-width, evenly spaced radial bins in order to use the FFT, but use irregular angular sampling to minimize the number of unnormalizable zero efficiency sinogram bins. To address persisting low efficiency bins, we perform 2D nearest neighbor radial smoothing, employ a semiiterative procedure to estimate the unsampled data, and mash the “in plane” and the first oblique projections to reconstruct the 2D image in the 3DRP algorithm. We present artifact free, essentially spatially isotropic images of Monte Carlo data with FWHM resolutions of 1.5 mm, 2.3 mm, and 3.1 mm at the center, in the bulk, and in the corners of the FOV respectively.}, owner = {Administrator}, pdf = {http://breast.lbl.gov/~wwwinstr/publications/Papers/LBNL-47102.pdf}, timestamp = {2006.04.19}, } @ARTICLE{Vouldis2005, author = {Angelos T Vouldis and Costas N Kechribaris and Theofanis A Maniatis and Konstantina S Nikita and Nikolaos K Uzunoglu}, title = {{I}nvestigating the enhancement of three-dimensional diffraction tomography by using multiple illumination planes.}, journal = {J Opt Soc Am A Opt Image Sci Vis}, year = {2005}, volume = {22}, pages = {1251--1262}, number = {7}, month = {Jul}, abstract = {The three dimensional (3-D) extension of the two well-known diffraction tomography algorithms, namely, direct Fourier interpolation (DFI) and filtered backpropagation (FBP), are presented and the problem of the data needed for a full 3-D reconstruction is investigated. These algorithms can be used efficiently to solve the inverse scattering problem for weak scatterers in the frequency domain under the first-order Born and Rytov approximations. Previous attempts of 3-D reconstruction with plane-wave illumination have used data obtained with the incident direction restricted at the xy plane. However, we show that this restriction results in the omission of the contribution of certain spatial frequencies near the omegaz axis for the final reconstruction. The effect of this omission is studied by comparing the results of reconstruction with and without data obtained from other incident directions that fill the spatial frequency domain. We conclude that the use of data obtained for incident direction in only the xy plane is sufficient to achieve a satisfactory quality of reconstruction for a class of objects presenting smooth variation along the z axis, while abrupt variations along the z axis cannot be imaged. This result should be taken into account in the process of designing the acquisition geometry of a tomography scanner.}, keywords = {Algorithms, Comparative Study, Computer-Assisted, Image Enhancement, Image Interpretation, Imaging, Information Storage and Retrieval, Lighting, Optical Coherence, Refractometry, Reproducibility of Results, Sensitivity and Specificity, Three-Dimensional, Tomography, 16053146}, owner = {Administrator}, pmid = {16053146}, timestamp = {2006.04.20}, } @CONFERENCE{Wei2004, author = {Wei Jiang; Sugimoto, S.; Okutomi, M.;}, title = {Omnidirectional 3D reconstruction using stereo multi-perspective panoramas}, booktitle = {SICE 2004 Annual Conference Volume 2, 4-6 Aug. 2004 Page(s):1128 - 1133 vol. 2}, year = {2004}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Wilczkowiak2005, author = {Marta Wilczkowiak and Peter Sturm and Edmond Boyer}, title = {{U}sing geometric constraints through parallelepipeds for calibration and 3{D} modeling.}, journal = {IEEE Trans Pattern Anal Mach Intell}, year = {2005}, volume = {27}, pages = {194--207}, number = {2}, month = {Feb}, abstract = {This paper concerns the incorporation of geometric information in camera calibration and 3D modeling. Using geometric constraints enables more stable results and allows us to perform tasks with fewer images. Our approach is motivated and developed within a framework of semi-automatic 3D modeling, where the user defines geometric primitives and constraints between them. It is based on the observation that constraints, such as coplanarity, parallelism, or orthogonality, are often embedded intuitively in parallelepipeds. Moreover, parallelepipeds are easy to delineate by a user and are well adapted to model the main structure of, e.g., architectural scenes. In this paper, first a duality that exists between the shape parameters of a parallelepiped and the intrinsic parameters of a camera is described. Then, a factorization-based algorithm exploiting this relation is developed. Using images of parallelepipeds, it allows us to simultaneously calibrate cameras, recover shapes of parallelepipeds, and estimate the relative pose of all entities. Besides geometric constraints expressed via parallelepipeds, our approach simultaneously takes into account the usual self-calibration constraints on cameras. The proposed algorithm is completed by a study of the singular cases of the calibration method. A complete method for the reconstruction of scene primitives that are not modeled by parallelepipeds is also briefly described. The proposed methods are validated by various experiments with real and simulated data, for single-view as well as multiview cases.}, keywords = {Adult, Aged, Algorithms, Animals, Articular, Artificial Intelligence, Arvicolinae, Automated, Autoradiography, Bacteriophage mu, Biological, Biological Markers, Biomechanics, Biotin, Bone Plates, Bone Transplantation, Brain, Calcium-Binding Protein, Calibration, Carcinoma, Cardiovascular, Cervical Vertebrae, Cluster Analysis, Comparative Study, Compressive Strength, Computer Simulation, Computer-Assisted, Confocal, Coronary Vessels, Cryoelectron Microscopy, Cysteine Endopeptidases, DNA Transposable Elements, Deafness, Dendrites, Dextrans, Diagnosis, Diastema, Dimerization, Diskectomy, Electron, Energy-Filtering Transmission Electron, Entorhinal Cortex, Epithelium, Equipment Failure Analysis, Extramural, Female, Finite Element Analysis, Fluorescent Antibody Technique, Fluorescent Dyes, Fluorodeoxyglucose F18, Gestational Age, Glucose, Hepatocellular, Hippocampus, Histocytochemistry, Humans, Image Cytometry, Image Enhancement, Image Interpretation, Image Processing, Imaging, In Vitro, Indirect, Information Storage and Retrieval, Interneurons, Intervertebral Disk, Kidney, Knee Injuries, Knee Joint, Magnetic Resonance Angiography, Magnetic Resonance Imaging, Male, Mechanical, Mice, Microscopy, Middle Aged, Models, Molar, Molecular, Movement, Myocardium, N.I.H., Nerve Fibers, Neural Pathways, Neurofilament Proteins, Neurological, Non-U.S. Gov't, Nude, Odontogenesis, Orthopedics, P.H.S., Para-Articular, Parahippocampal Gyrus, Parvalbumins, Pattern Recognition, Phosphorylase Kinase, Photogrammetry, Plants, Pliability, Polyethylenes, Posterior Cruciate Ligament, Potyvirus, Presynaptic Terminals, Prostheses and Implants, Prosthesis Design, Protein Structure, Rabbits, Radiopharmaceuticals, Range of Motion, Rats, Reconstructive Surgical Proce, Reconstructive Surgical Procedures, Reproducibility of Results, Research Support, Respiration, Scanning Transmission, Sensitivity and Specificity, Signal Processing, Sinoatrial Node, Skin Neoplasms, Spleen, Staining and Labeling, Statistical, Stress, Subtraction Technique, Tendons, Tensile Strength, Tertiary, Theoretical, Therapy, Three-Dimensional, Tibia, Time Factors, Tooth Germ, Transposases, Treatment Outcome, U.S. Gov't, Ultracentrifugation, Viral Proteins, Visible Human Project, Vitamin D-Dependent, Weight-Bearing, Wistar, X-Rays, dures, 15688557}, owner = {Administrator}, pmid = {15688557}, timestamp = {2006.04.20}, } @CONFERENCE{Wolf2001, author = {Wolf, L.; Shashua, A.;}, title = {Affine 3-D reconstruction from two projective images of independently translating planes}, booktitle = {Computer Vision, 2001. ICCV 2001. Proceedings. Eighth IEEE International Conference on Volume 2, 7-14 July 2001 Page(s):238 - 244 vol.2}, year = {2001}, abstract = {Consider two views of a multi-body scene consisting of k planar bodies moving in pure translation one relative to the other. We show that the fundamental matrices, one per body, live in a 3-dimensional subspace, which when represented as a step-3 extensor is the common transversal on the collection of extensors defined by the homograph matrices H1,...,Hk of the moving planes. We show that as much as five bodies are necessary for recovering the common transversal from the homograph matrices, from which we show how to recover the fundamental matrices and the affine calibration between the two cameras}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Xiao2005, author = {Yi Jun Xiao and Y. F. Li}, title = {{O}ptimized stereo reconstruction of free-form space curves based on a nonuniform rational {B}-spline model.}, journal = {J Opt Soc Am A Opt Image Sci Vis}, year = {2005}, volume = {22}, pages = {1746--1762}, number = {9}, month = {Sep}, abstract = {Analytical reconstruction of 3D curves from their stereo images is an important issue in computer vision. We present an optimization framework for such a problem based on a nonuniform rational B-spline (NURBS) curve model that converts reconstruction of a 3D curve into reconstruction of control points and weights of a NURBS representation of the curve, accordingly bypassing the error-prone point-to-point correspondence matching. Perspective invariance of NURBS curves and constraints deduced on stereo NURBS curves are employed to formulate the 3D curve reconstruction problem into a constrained nonlinear optimization. A parallel rectification technique is then adopted to simplify the constraints, and the Levenberg-Marquardt algorithm is applied to search for the optimal solution of the simplified problem. The results from our experiments show that the proposed framework works stably in the presence of different data samplings, randomly posed noise, and partial loss of data and is potentially suitable for real scenes.}, keywords = {Algorithms, Animals, Artificial Intelligence, Blood Vessels, Cardiovascular System, Computer Simulatio, Computer-Assisted, Confocal, Dental Models, Fluorescence, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Information Storage and Retrieval, Microscopy, Models, Non-U.S. Gov't, Numerical Analysis, Photogrammetry, Research Support, Statistical, Three-Dimensional, Zebrafish, n, 16211801}, owner = {Administrator}, pmid = {16211801}, timestamp = {2006.04.20}, } @ARTICLE{Xiaoguang2006, author = {Xiaoguang Lu; Jain, A.K.; Colbry, D.;}, title = {Matching 2.5D face scans to 3D models}, journal = {Pattern Analysis and Machine Intelligence, IEEE Transactions}, year = {2006}, volume = {28}, pages = {31 - 43}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Xu2005, author = {Xu, J.; Chutatape, O.;}, title = {3-D Optic Disk Reconstruction Via Combined Registration and Inclusion of Eye Optical Effects}, booktitle = {Engineering in Medicine and Biology Society, 2005. IEEE-EMBS 2005. 27th Annual International Conference of the 01-04 Sept. 2005 Page(s):3284 - 3287}, year = {2005}, abstract = {This paper describes a method of three-dimensional (3-D) optic disk reconstruction from a pair of stereo images. This is achieved through the implementation of various procedures that further enhance the accuracy including camera calibration, constraint-based combined registration, dense-depth recovery, and eye-optics inclusion. A combination of two registration methods is applied to precisely detect the correspondences, which are then converted into depths. The optical effect of light media within the eyeball is considered. A new method is proposed to calibrate and integrate this effect into the reconstruction process to provide an accurate 3-D image of optic disk. Compared with the result from Heidelberg Retina Tomograph (HRT), the 3-D image reconstructed by the proposed method shows good consistency and compatibility which indicates that it could be used as an alternative mode of 3-D viewing of the optic nerve head.}, owner = {Administrator}, timestamp = {2006.04.19}, } @CONFERENCE{Yatagai2004, author = {Yatagai, T.; Sando, Y.; Itoh, M.;}, title = {Three-dimensional full-color display of real existing objects using computer-generated holograms}, booktitle = {Lasers and Electro-Optics Society, 2004. LEOS 2004. The 17th Annual Meeting of the IEEE Volume 1, 7-11 Nov. 2004 Page(s):190 - 191 Vol.1 Digital Object Identifier 10.1109/LEOS.2004.1363175}, year = {2004}, abstract = {This work describes new method for the 3-D reconstruction of full-color real existing objects based on the previous report. In addition, methods for deciding certain parameters such as angular ranges, angular increments and projection numbers are presented for the purposes of making the magnifications constant for each color. Verification of this method by both numerical and optical reconstruction is also presented.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Ying2005, author = {Ying Kin Yu; Kin Hong Wong; Chang, M.M.Y.;}, title = {Recursive three-dimensional model reconstruction based on Kalman filtering}, journal = {Systems, Man and Cybernetics, Part B, IEEE Transactions}, year = {2005}, volume = {35}, pages = {587 - 592}, abstract = {A recursive two-step method to recover structure and motion from image sequences based on Kalman filtering is described in this paper. The algorithm consists of two major steps. The first step is an extended Kalman filter (EKF) for the estimation of the object's pose. The second step is a set of EKFs, one for each model point, for the refinement of the positions of the model features in the three-dimensional (3-D) space. These two steps alternate from frame to frame. The initial model converges to the final structure as the image sequence is scanned sequentially. The performance of the algorithm is demonstrated with both synthetic data and real-world objects. Analytical and empirical comparisons are made among our approach, the interleaved bundle adjustment method, and the Kalman filtering-based recursive algorithm by Azarbayejani and Pentland. Our approach outperformed the other two algorithms in terms of computation speed without loss in the quality of model reconstruction.}, owner = {Administrator}, timestamp = {2006.04.19}, } @ARTICLE{Younis2002, author = {Waheed A Younis and Stergios Stergiopoulos and David Havelock and Julius Grodski}, title = {{N}ondestructive imaging of shallow buried objects using acoustic computed tomography.}, journal = {J Acoust Soc Am}, year = {2002}, volume = {111}, pages = {2117--2127}, number = {5 Pt 1}, month = {May}, abstract = {The nondestructive three-dimensional acoustic tomography concept of the present investigation combines computerized tomography image reconstruction algorithms using acoustic diffracting waves together with depth information to produce a three-dimensional (3D) image of an underground section. The approach illuminates the underground area of interest with acoustic plane waves of frequencies 200-3000 Hz. For each transmitted pulse, the reflected-refracted signals are received by a line array of acoustic sensors located at a diametrically opposite point from the acoustic source line array. For a stratified underground medium and for a given depth, which is represented by a time delay in the received signal, a horizontal tomographic 2D image is reconstructed from the received projections. Integration of the depth dependent sequence of cross-sectional reconstructed images provides a complete three-dimensional overview of the inspected terrain. The method has been tested with an experimental system that consists of a line array of four-acoustic sources, providing plane waves, and a receiving line array of 32-acoustic sensors. The results indicate both the potential and the challenges facing the new methodology. Suggestions are made for improved performance, including an adaptive noise cancellation scheme and a numerical interpolation technique.}, keywords = {Acoustics, Algorithms, Humans, Time Factors, Tomography, X-Ray Computed, 12051432}, owner = {Administrator}, pmid = {12051432}, timestamp = {2006.04.20}, } @ARTICLE{Yu2005a, author = {Ying Kin Yu and Kin Hong Wong and Michael Ming Yuen Chang}, title = {{R}ecursive three-dimensional model reconstruction based on {K}alman filtering.}, journal = {IEEE Trans Syst Man Cybern B Cybern}, year = {2005}, volume = {35}, pages = {587--592}, number = {3}, month = {Jun}, abstract = {A recursive two-step method to recover structure and motion from image sequences based on Kalman filtering is described in this paper. The algorithm consists of two major steps. The first step is an extended Kalman filter (EKF) for the estimation of the object's pose. The second step is a set of EKFs, one for each model point, for the refinement of the positions of the model features in the three-dimensional (3-D) space. These two steps alternate from frame to frame. The initial model converges to the final structure as the image sequence is scanned sequentially. The performance of the algorithm is demonstrated with both synthetic data and real-world objects. Analytical and empirical comparisons are made among our approach, the interleaved bundle adjustment method, and the Kalman filtering-based recursive algorithm by Azarbayejani and Pentland. Our approach outperformed the other two algorithms in terms of computation speed without loss in the quality of model reconstruction.}, keywords = {80 and over, Acceleration, Aged, Algorithms, Ambulatory, Articular, Artificial Intelligence, Automated, Biological, Brain, Brain Diseases, Breast, Cadaver, Cluster Analysis, Comparative Study, Computer Graphics, Computer Simulation, Computer-Assisted, Electrodes, Electroencephalography, English Abstract, Epilepsy, Equipment Design, Equipment Failure Analysis, Extramural, Feasibility Studies, Feedback, Female, Gait, Head, Humans, Image Enhancement, Image Interpretation, Image Processing, Imaging, Immobilization, Information Storage and Retrieval, Ligaments, Lighting, Lunate Bone, Magnetic Resonance Imaging, Male, Middle Aged, Models, Monitoring, Movement, N.I.H., Non-U.S. Gov't, Numerical Analysis, Optical Coherence, P.H.S., Pattern Recognition, Physical Examination, Posture, Reconstructive Surgical Procedures, Refractometry, Reproducibility o, Reproducibility of Results, Research Support, Sensitivity and Specificity, Signal Processing, Skull, Software, Statistical, Stereotaxic Techniques, Subtraction Technique, Surgery, Systems Theory, Three-Dimensional, Tomography, Transducers, U.S. Gov't, X-Ray Computed, f Results, 15971927}, owner = {Administrator}, pmid = {15971927}, timestamp = {2006.04.20}, } @ARTICLE{Yu2005, author = {Yun-Qin Yu and Hu Peng and Bo Yu and Wen-Xiang Zhan and Ansheng Yu}, title = {[{T}hree-dimensional reconstruction research on {M}ingmen ({GV} 4)]}, journal = {Zhongguo Zhen Jiu}, year = {2005}, volume = {25}, pages = {411--413}, number = {6}, month = {Jun}, abstract = {OBJECTIVE: To show the space structures of Mingmen (GV 4) area and its adjacent tissues. METHODS: A frozen female corpse was cut into about 0.5 mm thick sections with a high-speed steel plane machine and photographed with digital and optical camera. Two 2-D transverse phase picture data sets were obtained and then were sequenced, matched, modified and divided. The 3-D reconstruction software was used to reconstruct the outline form of the lumbar part containing Mingmen (GV 4) to attain transverse phase picture data sets (3 022 sheets, 0.57 mm in thickness). The sagittal, coronal and different oblique plane were cut and the tissue structures in these pictures were analyzed. Thus, the reconstruction data sets were obtained. CONCLUSION: After the structures of Mingmen (GV 4) were reconstructed with computer, the form of Mingmen (GV 4) can be dynamically observed from any angle and the space construction law of gross form of Mingmen (GV 4) can be proved.}, keywords = {'t, Computer-Assisted, Confocal, Image Processing, Imaging, Microscopy, Morphogenesis, Non-U.S. Gov, Protoplasts, Research Support, Three-Dimensional, Tobacco, Vacuoles, 16309086}, owner = {Administrator}, pmid = {16309086}, timestamp = {2006.04.20}, }