Assignment 6      cont.
Page 3
Data from HapMap project will filled in the table of "Check Markers" task page..
Click on "LD Plot" task bar to see LD blocks. There are 3 Haplotype blocks appeared in this regions of chromosome X. Block 1 (18 kb) consists of 2 tagging SNPs : rs908005 (#8) and rs979848 (#9). Block 2 (80 kb) consists of 5 tagging SNPs : rs1548474 (#13), rs1356037(#14), rs1877924 (#15), rs997294 (#16) and rs1877923 (#17). Block 3 (48kb) consists of 6 tagging SNPs : rs1795683 (#24), rs1229073 (#25), rs1229076 (#26), rs1795686 (#27), rs1634652 (#28) and rs1634656 (#29).
Click on "Haplotypes" task bar to see 3 haplotype blocks.