Pattern Classification and Recognition of Movement Behavior of Medaka (Oryzias latipes) Using Decision Tree


Jeehoon Kim



Abstract. Behavioral sequences of the medaka (Oryzias latipes) were continuously investigated through an automatic image recognition system in increasing temperature from 25¢ª¬³ to 35¢ªC. The observation of behavior through the movement tracking program showed many patterns of the medaka. After much observation, behavioral patterns could be divided into basically 4 patterns: active-smooth, active-shaking, inactive-smooth, and inactive-shaking. The ¡°smooth¡± and ¡°shaking¡± patterns were shown as normal movement behavior, while the ¡°smooth¡± pattern was more frequently observed in increasing temperature (35¢ª¬³) than the ¡°shaking¡± pattern. Each pattern was classified using a devised decision tree after the feature choice. It provides a natural way to incorporate prior knowledge from human experts and contains the information in a logical expression tree. The main focus of this study was to determine whether the decision tree could be useful in interpreting and classifying behavior patterns of the medaka.

Reference
1. Alt, W., Hoffman, G. (Eds): Biological Motion. Lecture notes in Biomathematics 89. Springer-Verlag, Berlin (1989)
2. Tourtellot, M. K., Collins, R. D., Bell, W. J.: the problem of movelength and turn definition in analysis of orientation data. Journal of Theoretical Biology 150 (1991) 287-297
3. Bell, W. J., Kramer, E.: Search and anemotactic orientation of cockroach. Journal of Insect Physiology 25 (1975) 631-640
4. Bell, W. J., Kramer, E.: Sex pheromone-stimulated orientation of the American cockroach on a servosphere apparatus. Journal of Chemical Ecology 6 (1980) 287-295
5. Bell, W. J., Tobin, R. T.: Orientation to sex pheromone in the American cockroach: analysis of chemo-orientation mechanisms. Journal of Insect Physiology 27 (1981) 501-508
6. Sorensen, K. A., Bell, W. J.: Orientation responses of an isopod to temporal changes in relative humidity simulation of a ¡°humid patch¡± in a ¡°dry habita¡±, Journal of Insect Physiology 32 (1986) 51-57
7.National Bioresource Project, 12 November 2004, http://biol1.bio.nagoya-u.ac.jp:8000/
8. Chemicals Evaluation and Research Institute, Japan, "Development of Test Methods and Suitability of Medaka as Test Organism for Detection of Endocrine Disrupting Chemicals" ,Ministry of the Environment, Japan, February 2003, http://www.env.go.jp/chemi/end/medaka.html
9. Egami, N., Yamagami, K. and Shima, A.: Biology of Medaka, Tokyo Univ. Press, 1990
10. Egami, N.: Biology Learning from Medaka, Chuo-Koron, 1989

Links to other sites on the Web

Autumn