| Season One | 26 color episodes in 30 minute format |
| Ep | PN | Airdate | Title |
|
| 1 | 8802 | Oct 08/88 | The Jewel of Techecal |
| 2 | 8803 | Oct 15/88 | A Kind of Princess |
| 3 | 8804 | Oct 22/88 | Back to Oblivion |
| 4 | 8805 | Oct 29/88 | The Russian Exchange Student |
| 5 | 8801 | Nov 05/88 | Countdown to Nowhere |
| 6 | 8806 | Nov 12/88 | Bringing Down the House |
| 7 | 8807 | Nov 19/88 | The Beast and Beauty |
| 8 | 8808 | Nov 26/88 | The Fixer |
| 9 | 8809 | Dec 03/88 | The Alien Solution |
| 10 | 8810 | Dec 10/88 | Troubled Waters |
| 11 | 8811 | Jan 21/89 | The Invisible People |
| 12 | 8812 | Jan 28/89 | Kryptonite Kills |
| 13 | 8814 | Feb 04/89 | Revenge of the Alien |
| 14 | 8815 | Feb 11/89 | Revenge of the Alien, Part 2 |
| 15 | 8816 | Feb 18/89 | Stand Up and Get Knocked Down |
| 16 | | Feb 25/89 | Meet Mr. Mxyzptlk |
| 17 | 8813 | Mar 04/89 | Birdwoman of the Swamps |
| 18 | | Mar 11/89 | Terror From the Blue |
| 19 | | Mar 18/89 | War of the Species |
| 20 | | Apr 15/89 | Little Hercules |
| 21 | | Apr 22/89 | Mutant |
| 22 | | Apr 29/89 | The Phantom of the Third Division |
| 23 | | May 06/89 | Black Flamingo |
| 24 | | May 13/89 | Hollywood |
| 25 | | May 20/89 | Succubus |
| 26 | | May 27/89 | Luthor Unleashed |
| Season Two | 26 color episodes in 30 minute format |
| Ep | PN | Airdate | Title |
|
| 27 | | Oct 07/89 | With This Ring, I Thee Kill (Part 1) |
| 28 | | Oct 14/89 | Lex Luthor, Sentenced to Death (Part 2) |
| 29 | 8927 | Oct 21/89 | Metallo |
| 30 | | Oct 28/89 | Young Dracula |
| 31 | | Nov 04/89 | Nightmare Island |
| 32 | | Nov 11/89 | Bizarro, the Thing of Steel (Part 1) |
| 33 | | Nov 18/89 | The Battle With Bizarro (Part 2) |
| 34 | | Nov 25/89 | Mr. and Mrs. Superboy |
| 35 | | Dec 02/89 | Programmed For Death |
| 36 | | Dec 09/89 | Superboy's Deadly Touch |
| 37 | | Dec 16/89 | The Power of Evil |
| 38 | | Jan 06/90 | Superboy... Rest in Peace |
| 39 | | Jan 13/90 | Super Menace |
| 40 | | Jan 20/90 | Yellow Peri's Spell of Doom |
| 41 | | Jan 27/90 | Microboy |
| 42 | | Feb 03/90 | Run, Dracula, Run |
| 43 | | Feb 10/90 | Brimstone |
| 44 | | Feb 17/90 | Abandon Earth (Part 1) |
| 45 | | Feb 24/90 | Escape to Earth (Part 2) |
| 46 | | Mar 03/90 | Superstar |
| 47 | | Apr 21/90 | The Woman Called Tiger Eye |
| 48 | | Apr 28/90 | Revenge From the Deep |
| 49 | | May 05/90 | The Haunting of Andy McAlister |
| 50 | | May 12/90 | Nick Knack |
| 51 | | May 19/90 | The Secrets of Superboy |
| 52 | | May 26/90 | Johnny Casanova and the Case of the Secret Serum |
Names changed to The Adventures of Superboy
| Season Three | 26 color episodes in 30 minute format |
| Ep | PN | Airdate | Title |
|
| 53 | | Oct 04/90 | The Bride of Bizarro |
| 54 | | Oct 11/90 | The Bride of Bizarro, Part 2 |
| 55 | | Oct 18/90 | The Lair |
| 56 | | Oct 25/90 | Neila |
| 57 | | Nov 01/90 | Roads Not Taken |
| 58 | | Nov 08/90 | Roads Not Taken, Part 2 |
| 59 | | Nov 15/90 | The Sons of Icarus |
| 60 | | Nov 22/90 | Carnival |
| 61 | | Nov 29/90 | Test of Time |
| 62 | | Dec 03/90 | Mindscape |
| 63 | | Dec 10/90 | Superboy Lost |
| 64 | | Dec 31/90 | Special Effects |
| 65 | | Jan 07/91 | Neila and the Beast |
| 66 | | Jan 14/91 | Golem |
| 67 | | Jan 21/91 | A Day in the Double Life |
| 68 | | Jan 28/91 | Bodyswap |
| 69 | | Feb 04/91 | Rebirth |
| 70 | | Feb 18/91 | Rebirth, Part 2 |
| 71 | | Feb 25/91 | Werewolf |
| 72 | | Apr 08/91 | People vs. Metallo |
| 73 | | Apr 15/91 | Jackson and Hyde |
| 74 | | Apr 22/91 | Mine Games |
| 75 | | Apr 29/91 | Wish For Armageddon |
| 76 | | May 06/91 | Standoff |
| 77 | | May 13/91 | Road to Hell |
| 78 | | May 20/91 | Road to Hell, Part 2 |
| Season Four | 22 color episodes in 30 minute format |
| Ep | PN | Airdate | Title |
|
| 79 | | Sep 30/91 | A Change of the Heart |
| 80 | | Oct 07/91 | A Change of the Heart, Part 2 |
| 81 | | Oct 14/91 | The Kryptonite Kid |
| 82 | | Oct 21/91 | The Basement |
| 83 | | Oct 28/91 | Darla Goes Ballistic |
| 84 | | Nov 04/91 | Paranoia |
| 85 | | Nov 11/91 | Know Thine Enemy |
| 86 | | Nov 18/91 | Know Thine Enemy, Part 2 |
| 87 | | Nov 25/91 | Hell Breaks Loose |
| 88 | | Dec 02/91 | Into the Mystery |
| 89 | | Jan 13/92 | To Be Human |
| 90 | | Jan 20/92 | To Be Human, Part 2 |
| 91 | | Jan 27/92 | West of Alpha Centauri |
| 92 | | Feb 03/92 | Threesome |
| 93 | | Feb 10/92 | Threesome, Part 2 |
| 94 | | Feb 17/92 | Out of Luck |
| 95 | | Feb 24/92 | Who is Superboy? |
| 96 | | Apr 13/92 | Cat and Mouse |
| 97 | | Apr 20/92 | Obituary For a Super-Hero |
| 98 | | Apr 27/92 | Metamorphosis |
| 99 | | May 04/92 | Rites of Passage |
| 100 | | May 11/92 | Rites of Passage, Part 2 |