Your ClustalW Results
Your ClustalW Results:
Pairwise Scores:
CLUSTAL W (1.81) Multiple Sequence Alignments
Sequence format is Pearson
Sequence 1: IgLC1intronregion 1558 bp
Sequence 2: IgLC2intronregion 1324 bp
Sequence 3: IgLC3intronregion 1309 bp
Sequence 4: IgLC4pseudointronregion 168 bp
Sequence 5: IgLC5pseudointronregion 1315 bp
Sequence 6: IgLC6pseudointronregion 1336 bp
Sequence 7: IgLC7intronregion 667 bp
Start of Pairwise alignments
Aligning...
Sequences (3:4) Aligned. Score: 70
Sequences (4:5) Aligned. Score: 66
Sequences (1:2) Aligned. Score: 4
Sequences (4:6) Aligned. Score: 12
Sequences (4:7) Aligned. Score: 9
Sequences (5:6) Aligned. Score: 5
Sequences (1:3) Aligned. Score: 5
Sequences (1:4) Aligned. Score: 14
Sequences (2:3) Aligned. Score: 99
Sequences (3:5) Aligned. Score: 66
Sequences (2:4) Aligned. Score: 70
Sequences (5:7) Aligned. Score: 13
Sequences (1:5) Aligned. Score: 4
Sequences (3:6) Aligned. Score: 5
Sequences (6:7) Aligned. Score: 69
Sequences (3:7) Aligned. Score: 11
Sequences (1:6) Aligned. Score: 2
Sequences (1:7) Aligned. Score: 7
Sequences (2:5) Aligned. Score: 65
Sequences (2:6) Aligned. Score: 5
Sequences (2:7) Aligned. Score: 11
Guide tree file created: [/net/nfs0/vol1/production/w3nobody/tmp/180858.70265-509679.dnd]
Start of Multiple Alignment
There are 6 groups
Aligning...
Group 1: Sequences: 2 Score:24652
Group 2: Sequences: 3 Score:16128
Group 3: Sequences: 4 Score:2177
Group 4: Delayed
Group 5: Sequences: 2 Score:8779
Group 6: Sequences: 6 Score:6372
Sequence:1 Score:7161
Alignment Score 46370
CLUSTAL-Alignment file created [/net/nfs0/vol1/production/w3nobody/tmp/180858.70265-509679.aln]
Your Multiple Sequence Alignment:
180858.70265-509679.aln
CLUSTAL W (1.81) multiple sequence alignment
IgLC2intronregion --------------------------------------------------
IgLC3intronregion --------------------------------------------------
IgLC5pseudointronregion --------------------------------------------------
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion --------------------------------------------------
IgLC7intronregion --------------------------------------------------
IgLC1intronregion TAAGTGGCTCTCAACCTTTCCCAGCCTGTCTCACCCTCTGCTGTCCCTGG 50
IgLC2intronregion ------------GAGTCTCTTCTCCCCTCTCCT------TCCCC--GCTC 30
IgLC3intronregion ----------GTGAGTCTCTTCTCCCCTCTCCT------TCCCC--GCTC 32
IgLC5pseudointronregion ----------ATGAGTCTTTTCCCCCTCCTTCCCTGGTCTCCCCAAGGTA 40
IgLC4pseudointronregion ----------ATGAGTCTCTTCTTCCCTTTCTTTC---CCTGCCAAGTTG 37
IgLC6pseudointronregion ----------GTGAGTCCCCTTTTCTATTCTTTTGGGTCTAGGGTGAGAT 40
IgLC7intronregion --------------------------------------------------
IgLC1intronregion AAAATCTGTTTTCTCTCTCTGGGGCTTCCTCCCCTCTGTCCTCCCAGCCT 100
IgLC2intronregion TTGGGACA--ATTTCTGCTGTTTTTGTTTGTT-TCTGTATCTTGTCTCAA 77
IgLC3intronregion TTGGGACA--ATTTCTGCTGTTTTTGTTTGTT-TCTGTATCTTGTCTCAA 79
IgLC5pseudointronregion CTGGGAAA--TTTTCTGCTGCTTTTGTTCTTT-TCTGTATCTTGTGTTGA 87
IgLC4pseudointronregion GTGACA-A--TTTTATTCTGATTTCGATCTTTGTCTGTGACTTGCCACAG 84
IgLC6pseudointronregion CTGGGGAGACTTTTCTGTCCTTTCTGTTCTCTCTAGGGTAGAGGTCTCAA 90
IgLC7intronregion --------------------------------------------------
IgLC1intronregion TAAGCACTGACCCTTACCTTTCTCCATGGGGCCTGGAGGAGGTGCATTAG 150
IgLC2intronregion CTTGTGGTCAGCCTTTCTCCCTGCATCCCAGGCC-TGAGCA--AGGACCT 124
IgLC3intronregion CTTGTGGTCAGCCTTTCTCCCTGCATCCCAGGCC-TGAGCA--AGGACCT 126
IgLC5pseudointronregion CCTGTGGTGATGCTTTCTCTCTGGAGCCTAGGCCCTGGTCA--AGGACCT 135
IgLC4pseudointronregion CCTGTGGTCAGGGTTTCCTTTGGGACCTCGGTCCTGGGAGG--CTGATCT 132
IgLC6pseudointronregion TCTCTCTGGGGTCTGCCACCATTGCCTTTTTTCCTGGCCCC--AATTTCC 138
IgLC7intronregion --------------------------------------------------
IgLC1intronregion TCTCCGGGTAACCGGCAGGAAGGGCCTCCACAGTGGGAGCAGCCGGATGC 200
IgLC2intronregion CTG---CCCTCCCTGTTCAGACCCTTGCTTG-CCTCAGCAGGTCACTACA 170
IgLC3intronregion CTG---CCCTCCCTGTTCAGACCCTTGCTTG-CCTCAGCAGGTCACTACA 172
IgLC5pseudointronregion CTC---CCCTCCCTGTTTAGACCCTTA-----CCTCAGTGGGTCACCAAG 177
IgLC4pseudointronregion CTC---TCCTCCCTATTCAGACCCCTGTATG-CCTCAGCT---------- 168
IgLC6pseudointronregion TCCAGCCTGTCCCTTCTTAGGCACCTGGTGGGGCATGATGGGAAGATCCC 188
IgLC7intronregion --------------------------------------------------
IgLC1intronregion AGCCTGGTCCCGGGGCCTGAGCTGGGATTGGGCAGGGTCAGGGCTCCTCC 250
IgLC2intronregion ACCACTTCACCTCTGACCACAGGGGCAGGGGACTAGATAGAATGACCTAC 220
IgLC3intronregion ACCACTTCACCTCTGACCGCAGGGGCAGGGGACTAGATAGAATGACCTAC 222
IgLC5pseudointronregion ACCCCTTCACCTCTGACCTCAGATGTAGGGCACTAGACTGGATGACCTAC 227
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion AGTGACCTCTTAATGCTCCCTGCTCAGGCCTGAACCTGCCGCTGTCACTC 238
IgLC7intronregion --------------------------------------------------
IgLC1intronregion TCTCTTCCAGGGCAGATGTCTGAGTGAGGGACAGAGGCTGGTTCTGATGA 300
IgLC2intronregion TGAGCCTCGTC-TGTCTGTCTGTCTGTCTGTCTCTCTGTTTGTCTCTCTG 269
IgLC3intronregion TGAGCCTCGTC-TGTCTGTCTGTCTGTCTGTCTCTCT------------- 258
IgLC5pseudointronregion TGAGACTCATC-TGTCTGTCTGTCTGCC---------------------- 254
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion AGGGGGCATTC-TCCCCTGGGCTCTGGGATGTTCTGCTCCCTCGCACAGA 287
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGGGCCCTGCAGTGTCCTTAGGGACATTGCCCAGTGACTCCTGGGGTCAA 350
IgLC2intronregion TCTCTCTGTTTGTCTCTCTGACTGTCTGACAGGCGCAGGCTGGGTCTCTA 319
IgLC3intronregion -CTCTCTGTTTGTCTCTCTGTCTGTCTGACAGGCGCAGGCTGGGTCTCTA 307
IgLC5pseudointronregion ------------------------------AGAGCCAGGCTGCTTCCCTA 274
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GTCTCCAGTCCCCAAAGACCAGCAGAGCAGGGGCTCAGGCTGGGGCACCA 337
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGACAGAGGCTGCTGGGGTGGGCCTGGGAGCTGCTGAGTCTCATAGTCTA 400
IgLC2intronregion AGCC--TTGTTCTGTTCTGGCCTCCTCAGTCTGGGTTCTTGTCGGA-ACA 366
IgLC3intronregion AGCC--TTGTTCTGTTCTGGCCTCCTCAGTCTGGGTTCTTGTCGGA-ACA 354
IgLC5pseudointronregion AAAC--TTGCTCAGTTCTGTCCTCCCCCACCTGGGCTTCTGTCTAA-CGA 321
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GGGCCATGGGACAGGGGAAGGATGCTGGAAAAAGTTCAGCTTCCCA-GGG 386
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGGGAGCAGCCCCAAGAACAGCTGAGGGTCTAGGCTGAGGACTGGATGCC 450
IgLC2intronregion GCTTTGTCCTTGGGTTACCTGGGTTCCATCTCCTGGGGAATTGGGAACAA 416
IgLC3intronregion GCTTTGCCCTTGGGTTACCTGGGTTCCATCTCCTGGGGAATTGGGAACAA 404
IgLC5pseudointronregion ACTTTGTGCAAGGGAAACTGAGGCCCCATCTCATGAGGGAGAGGGAACAA 371
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion TTCTGGGTCCCAACTATGGGGCTGCTTTAAACACCAAGAAGGGAGGCCTT 436
IgLC7intronregion --------------------------------------------------
IgLC1intronregion AATCCAGCCTGGGAGGGCCACACGGCCTGGTGACACAGAGGTCACCCCAA 500
IgLC2intronregion GGGGTCTGAGGGAGGCACCTCCTGGGAGACTTTAGAAGGACCCAGTGCCC 466
IgLC3intronregion GGGGTCTGAGGGAGGCACCTCCTGGGAGACTTTAGAAGGACCCAGTGCCC 454
IgLC5pseudointronregion GGGGCTCGAAGGAGTGACCACCTGGTGGACTTTAGAAGGACCTGAAACCC 421
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion TGACTGGGGACTTGGGGAAATGAAGGGGGACAAGGATGGAGGAAGAATGT 486
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGGGAGACCAATGGAGGGCACAGAGAGGGCTCTGGGTCTAGGCTGCAGCT 550
IgLC2intronregion TCGGGGCTGATGCTCGGGAATCA-----CAGAGCT----GGGACCCAG-- 505
IgLC3intronregion TCGGGGCTGATGCTCGGGAATCA-----CAGAGCT----GGGACCCAG-- 493
IgLC5pseudointronregion TCAGAGCCAAGATAGGGGAATGAAAACTCAGAGTCTC--AGGGCCCAGTC 469
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CCTGTGAGGTGGCGCCAGGGTGCTGGGTCCCTCCTCC--TCCCCCGGGAC 534
IgLC7intronregion --------------------------------------------------
IgLC1intronregion CTGTGGCCTGTGCTGGGTCATGAGGACATGGGGACACAGAGGGACGGGTG 600
IgLC2intronregion --------------AGCCAGGATCCAGACCCAGAATGAGGTAGGAGGTGG 541
IgLC3intronregion --------------AGCCAGGATCCAGACCCAGAATGAGGTAGGAGGTGG 529
IgLC5pseudointronregion CCCTGGACTGTGGGACTCTGGATCCAGGCTGGGAACAAGGTAGGAGGTGC 519
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion AGGCAGGCTGCCATAGACAGGGTGGTTCTCAGGACACTCAGTCCAAGGTT 584
IgLC7intronregion --------------------------------------------------
IgLC1intronregion AGACTGGGTGAGGTGCCAGAATCCAACCCTCCCAGGACAGTCACCAGAAA 650
IgLC2intronregion AGGGGCTGCCCTGGGCGTCTGGGGGCTGCCAGGGACTGAGCCCTGAGCCA 591
IgLC3intronregion AGGGGCTGCCCTGGGCGTCTGGGGGCTGCCAGGGACTGAGCCCTGAGCCA 579
IgLC5pseudointronregion AGGGGCCTCTCCAGGTTTCTGTGGGCTCCCAGGGAGAGAGCCCTGAGCTG 569
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion AGAGCCTCCCCATCCCACCCAAAAAGAGAGACCCCCAAAGCAGATGCTGA 634
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGAGACAGTCTCTTAGGGCAGAGATGTGTCTGTCCCTGGAGCCCCGTCAC 700
IgLC2intronregion GCCTGAGACTCAGGAAACCCCGTCAGGAGGGAGAAGGGAGAAGCAGACTC 641
IgLC3intronregion GCCTGAGACTCAGGAAACCCCGTCAGGAGGGAGAAGGGAGAAGCAGACTC 629
IgLC5pseudointronregion GTCTGGGACCCATGAAGCCCTGTCAGGAGGGACGGGA-------AGGCTC 612
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GGGAGGCACTCCTGGTGGGCGCAGGTGACAGGGACCTGTCAGG-ACAGAC 683
IgLC7intronregion ------------------------------------------G-AGAGTC 7
IgLC1intronregion CTCTGGGGCCCAGTGTCTCTCTGTTCACGGATCGGCCTCCTGCCTTCCTC 750
IgLC2intronregion TGGACACCAGAAAGCCAGGGGAAGGGTCACAAAAGGAGTGGATGTGACGG 691
IgLC3intronregion TGGACACCAGAAAGCCAGGGGAAGGGTCACAAAAGGAGTGGATGTGACGG 679
IgLC5pseudointronregion TGGACATGAAGGAGCCAGGTGAAGTGTCACGAAAGGCCATGGCATTCAGG 662
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion ATTTGTCCTAGGACAGCCAGATCTCCCAACGACAGGGAGACCCCATAGAG 733
IgLC7intronregion AGATCCCCCAG-------ATAACTTCTCACGACATGGAGACTCTTTCGAA 50
IgLC1intronregion AAAGGGCATGTTAGACTCAGGAAATGAC-CAGAGGGGAGTGAATGAGGGG 799
IgLC2intronregion AAGGGCGGGCTCCTGGGTCTCTTCAGAACATATCCCCTGTGCCCAGGGGG 741
IgLC3intronregion AAGGGCGGGCTCCTGGGTCTCTTCAGAACATATCCCCTGTGCCCAGGGGG 729
IgLC5pseudointronregion GAGGT--GGCTGATGGGTCTCTGTGGGAGGCA-CCCCTAGAAGCAGGAAC 709
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CAGACACAGCGCCAGGCTCAGAACAGAAAATATACCTCACATGCAAG--C 781
IgLC7intronregion CAGACAAAGCTCCACGTTCAGCTCAGGGAGTAAAAAAAAAATGCCTC--A 98
IgLC1intronregion TGCAGAGAACTCCATGGCTACCAGGTGAAGTTTGGGGTCATCACAGGCTG 849
IgLC2intronregion ATCAGA--GGG-GCAGAGTCCACTGCGTGAAAGCCCCACTGCTATGACCA 788
IgLC3intronregion ATCAGA--GGG-GCAGAGTCCACTGCGTGAAAGCCCCACTGCTATGACCA 776
IgLC5pseudointronregion CCCTGA--GTTCACCGACAGGCATATCCCAAGGCAGAAAAACTGTAGATT 757
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CCTCCA--TCTCCTGGA-CTCCCAGGACCCGGCTCCCAGGACTGACATCC 828
IgLC7intronregion AATGGA--GGCCTTTGATCTACTGGAATCCAGCCCCCAGGACTGACACCC 146
IgLC1intronregion CTGGGGTGGGCCTGGGGGCTGCTGAGTCTCATAGTCTGTGGGAGCAGCCC 899
IgLC2intronregion GGTAGCCGGGACGTGGGGTGGATGCCAGAAAAGACTCCACGGAATAAGAG 838
IgLC3intronregion GGTAGCCGGGACGTGGGGTGGATGCCAGAAAAGACTCCACGGAATAAGAG 826
IgLC5pseudointronregion GGC--CCTAAACACAGAG-AGACTCTAACACAGACTCCACAGAC----AA 800
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CCT--------CCC---------CACCAAGGGGCCTCTGTGGGA---AAG 858
IgLC7intronregion TGT--------CTCACCAGGCAGCCCAGAGGGGTCTCTGCAGGG---AGG 185
IgLC1intronregion CAGGAACAGCTGAGGTGAAGGGTTCTGTGGTCGGGCTTGTGGAGACAGGA 949
IgLC2intronregion AGAGCCCAGGACAG-CAGGCAG--GCTCTCCGATCCCCCCAGGCCCTTGC 885
IgLC3intronregion AGAGCCCAGGACAG-CAGGCAG--GCTCTCCGATCCCCCCAGGCCCTTGC 873
IgLC5pseudointronregion AGAGCCCAGGACAGACAGACAGTGGGACTTGGGTGAGCAAAGGCCCTGAC 850
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion TGGGGCAGAGACTG-CAATGATGGTGCTGGGG-GATATGTGAGGAAGAAA 906
IgLC7intronregion TGGGGTGGGGGCTG-CAATGATGGCACCAGGGAGATGTGTGGGTAAGAAA 234
IgLC1intronregion AACATCTCAGAGCCTCAGAGGA--GCCCTGAGGCTTGTCTAGGTGGAGCC 997
IgLC2intronregion CCCA-TACACGGGCTCCAGAACACACATTTGGCTGGAACAGCCTGAGGGA 934
IgLC3intronregion CCCA-TACACGGGCTCCAGAACACACATTTGGCTGGAACAGCCTGAGGGA 922
IgLC5pseudointronregion TCCACTGCAGAAGATCCAGGAGAGACGGATG-TGGGTACAAACAGAGTTC 899
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion TTCACTTGTCAAAAGGGAGGAGA-ACCTAAAAACAGGAC--ACAGATGCC 953
IgLC7intronregion CCCACTCCCTGTGAGAGAGAAGA-GCCTGAACCCAGGACCAACAGCTGCC 283
IgLC1intronregion CACTCCTTGCCAGGAGAGCCAAGTGGGCTGGGCTGGGGCAGAGCCCGGTG 1047
IgLC2intronregion CCA---AAAGGCCCCAGTATCCCACAGAGCTGAGGAGCCAGGCCAGAAAA 981
IgLC3intronregion CCA---AAAGGCCCCAGCATCCCACAGAGCTGAGGAGCCAGGCCAGAAAA 969
IgLC5pseudointronregion TTACGTGAGAGACCCACTCTCCCCCAACCCAGAGCAGCTGTGTCAGGTGA 949
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CT-CGTGAACAGACCCAGAGGAGGG-ACCTGGCAGGGGATGTTCAGACAG 1001
IgLC7intronregion CTGCATGAAGAGATGAGAACAAGGGGAACTGGTAGGAGGTGTTCAGACAG 333
IgLC1intronregion CCTGTGAGGGATAGGAAGCTCCAGTTCAAAGCAGGCTTGGGTCTCCCCAC 1097
IgLC2intronregion GTAA---CCCCAGAGTTCGCTGTGCAGGGGAGACACAGAGCTCT------ 1022
IgLC3intronregion GTAA---CCCCAGAGTTCGCTGTGCAGGGGAGACACAGAGCTCT------ 1010
IgLC5pseudointronregion GAAAAGTTTCCAGAGTGAATCTAACAAGAGGCTCACAGAGCTCAGAGAAC 999
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion AGACGTCCCCCAAGGAAAGACGAGGGCCCAGGGCTGAACCCAGCC----- 1046
IgLC7intronregion ACAC----CCCCAAGATAGACAAATACCCAGGGTGAGATGTGGTCC---- 375
IgLC1intronregion ACACTGCCTGCCAGGACAGTCCTACAGGATGAGCAGGGGACCCACAGTTC 1147
IgLC2intronregion ----------CTTTATC-TGTCAGGATGGCAGGAGGGGACAGGGTCAGGG 1061
IgLC3intronregion ----------CTTTATC-TGTCAGGATGGCAGGAGGGGACAGGGTCAGGG 1049
IgLC5pseudointronregion ACAGCCAGAGCCGGATCACGTCAGGATGACAGGGTGAGGCAGCGCCAGGC 1049
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion --------AGCGTCGGGGAGCATAG-GTGAGGTGAGAGCTGGCTG----- 1082
IgLC7intronregion ------TGGACTCCATCCCATCCAGTGTGGAGCCAGCACCGGTGGGGGTC 419
IgLC1intronregion ACGGAGGAGGCTCTAGGTCCTGGAAGAATAAAGTGGGTGATGGAGGGGGG 1197
IgLC2intronregion CGCTGAGGGTCAGATGTCGGTGTTGGGGGCCAAGGCCCCGAG--AGATCT 1109
IgLC3intronregion CGCTGAGGGTCAGATGTCGGTGTTGGGGGCCAAGGCCCCGAG--AGATCT 1097
IgLC5pseudointronregion AATTGAAGGTCCACTGTCTATACAAAAGCCCAAGTCCTTGGA--AGATTT 1097
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion -ATAAGGAGGGGAGAATCTGGAGAGGAGGC-TGGAGCAGAAG--AGGCCT 1128
IgLC7intronregion TATAGGTGATGGAAAATATGAAAAAGAGAC-AGATCCAAGAG--GGGG-- 464
IgLC1intronregion TATAGGGATGGAAATGAGGGATCCAGGGGTCAAGGCCAGATTCTAAACTC 1247
IgLC2intronregion CAGGACAGGTGGTCAG--GTGTCTAAGGTAAAACAGCTCCCCGTGCA-GA 1156
IgLC3intronregion CAGGACAGGTGGTCAG--GTGTCTAAGGTAAAACAGCTCCCCGTGCA-GA 1144
IgLC5pseudointronregion CCAAACAGGCGATGGGCAGGGGCCAAGCTCAGA-GGTTTTCTG-ACT-GA 1144
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GATTCTCCTCAGTCCT------CAGATGCTGAGGAGTTTCCCATCAG-GA 1171
IgLC7intronregion -----TCTGTGACCCC------CAAGAGTGGGGGCAACTCCCATCTG-AC 502
IgLC1intronregion AGACTCCAGAGATCAGAGAAGAAGGAACACAGCCTGCCCTGGGTATATGG 1297
IgLC2intronregion TCAGGGCATAGTGGAAAACACCCTG----ACCCCTCTGCC-TGGCATAGA 1201
IgLC3intronregion TCAGGACATAGTGGAAAACACCCTG----ACCCCTCTGCC-TGGCATAGA 1189
IgLC5pseudointronregion -CAGAGTTCTTTTAGGAACATGATGTCACACCCTTCTGAGACAGTGTGGA 1193
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GGTAAGCGTCCCCGC-CACCGCCAAGTTGACCTCAGTA---CAGCAAGGG 1217
IgLC7intronregion AGCGAGTGTCTCCACTCACCGCTGACCTGACCTCAGTC---CAGCAAGGG 549
IgLC1intronregion AGAAATTGAGGCTGTAGAGGAGAGGGGCTGGGCCAGGACACCTGTGAAAG 1347
IgLC2intronregion CC----TTCAGACACAGAGCCCCTGAACAAGGGCACCCCAACACCTCATC 1247
IgLC3intronregion CC----TTCAGACACAGAGCCCCTGAACAAGGGCACCCCAACACCTCATC 1235
IgLC5pseudointronregion CCACATCTGAGAGGTCCTGCACTGGTACTGGGGGGCCTGAACAC-TCCTC 1242
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion CCCAGCCTGAGGTCCCTATCCTGGGCCTTAG-----TCCTTCACCCACCT 1262
IgLC7intronregion TCCGGCCTGAGGTCCCTGCCCTGGGCCTTAG-----TCCCATACCCACTT 594
IgLC1intronregion GT-GACTTGGGAGGGCTCCTAGGAAGGCACAGAGCTGTCTGCTCTCCACA 1396
IgLC2intronregion ATATACTGAGGTCAGGGGCTCCCCAGGTGGACACCAGGACTCTGACCCCC 1297
IgLC3intronregion ATATACTGAGGTCAGGGGCTCCCCAGGTGGACACCAGGACTCTGACCCCC 1285
IgLC5pseudointronregion ATGCACTGAGGTCAGGGGCTCCCCAGGTGGACACCAGGACTCTGACCTCC 1292
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion GAAAACTGAGGCCAGGGGCTCCCCAGGTGGACACCAGGACTCTGACCCCC 1312
IgLC7intronregion CAAGACTGAGGTCAGGGGCTCCCCAGGTGGACACCAGGACTCTGACCCCC 644
IgLC1intronregion GGGCATGAGTGGAAAGGATGGGGAAAGAAGAGGAGAGAACCCCGGGTGG- 1445
IgLC2intronregion TGCCCCTCATCCACCCCGCAGGTCAGC----------------------- 1324
IgLC3intronregion TGCCCCTCATCCACCCCGCAGGTC-------------------------- 1309
IgLC5pseudointronregion TGCCCCTCATCCATTCTGCAGGT--------------------------- 1315
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion TGCCCCTCATCCACCCCGCAGGTC-------------------------- 1336
IgLC7intronregion TGCCCCTCATCCACCCCGCAGGT--------------------------- 667
IgLC1intronregion -ACCGGATGGCCACACTGTGAACCCTCCCAGAGACTTTAGACAGAGAGAG 1494
IgLC2intronregion --------------------------------------------------
IgLC3intronregion --------------------------------------------------
IgLC5pseudointronregion --------------------------------------------------
IgLC4pseudointronregion --------------------------------------------------
IgLC6pseudointronregion --------------------------------------------------
IgLC7intronregion --------------------------------------------------
IgLC1intronregion GGGCTCCACAACACCCCGGTATTCTGTCTGCCCTCTCTCACCCCCTTCCC 1544
IgLC2intronregion --------------
IgLC3intronregion --------------
IgLC5pseudointronregion --------------
IgLC4pseudointronregion --------------
IgLC6pseudointronregion --------------
IgLC7intronregion --------------
IgLC1intronregion TGTCCACACAGGTC 1558
Your guide tree:
180858.70265-509679.dnd
(
(
(
IgLC1intronregion:0.48564,
(
IgLC6pseudointronregion:0.17679,
IgLC7intronregion:0.12906)
:0.31048)
:0.26988,
IgLC4pseudointronregion:0.12911)
:0.01339,
(
IgLC2intronregion:0.00475,
IgLC3intronregion:0.00060)
:0.16033,
IgLC5pseudointronregion:0.17998);