No one knows what the future will bring but these resources might assist the reader in their continuing education to better understanding the possibilities. The accuracy of any information listed directly or indirectly is not guaranteed. The reader is encouraged to download this page if they find it useful as it may not remain hosted for a long time.

"Any state, any community, or for that matter any citizen that failed to prepare -- assuming that the federal government could take care of them during a pandemic -- would be tragically wrong," - Health and Human Services Secretary Mike Leavitt on December 14, 2005. Flu pandemic could kill 30,000 in Minnesota,
 

Collection of resources about H1N1
(revised 8/30/2009)

 

"But it is mild", but not really

 
  36000 debunked  
  Severe disease in the press  
Those most at risk   Data reporting- expect less
 Schools and other focal points   Testing misses cases
Waves of flu   Testing/Treatment Flowchart
  Anti-viral supply / Effectiveness  
  Vaccine and production  
  Attack (infection) rate  
  Severity, calculations, and response  
     
  Links  

 

 

The media theme "but it is mild" is in part true, but it is clearly misleading the public

1. A modern reference point for pandemics is 1918 and this is from a paper on the CDC website from the Dr. who sequenced the 1918 virus. Notice how the 1918 virus descriptions echo the current pandemic descriptions in severity.
1918 Influenza: the Mother of All Pandemics
Dr. Jeffery K. Taubenberger, M.D. & Ph.D., and Dr. David M. Morens, M.D.
Emerging Infectious Diseases • www.cdc.gov/eid • Vol. 12, No. 1, January 2006
http://www.cdc.gov/ncidod/eid/vol12no01/pdfs/05-0979.pdf

a. “An estimated one third of the world’s population (or ≈500 million persons) were infected and had clinically apparent illnesses during the 1918–1919 influenza pandemic.”

b. “Total deaths were estimated at ≈50 million and were arguably as high as 100 million.”

c. “Despite the extraordinary number of global deaths, most influenza cases in 1918 (>95% in most locales in industrialized nations) were mild and essentially indistinguishable from influenza cases today.”

d. “nearly half of the influenza-related deaths in the 1918 pandemic were in young adults 20–40 years of age, a phenomenon unique to that pandemic year.”

2. In 2009, this “mild” theme has been repeated over and over but does not jibe with the information below. In June they changed the theme from “mild” to their new theme "mild to moderate" but the USA public may be fixated on the “mild” message. When connecting the pieces of information that follow throughout this document one can clearly see that those with knowledge are very concerned about this fall of 2009 and beyond. Using the data below on might speculate USA 307 million * 30% CAR * 2% hospitalized * 1/3 hospitalized on vents = 600,000 needing vents.
 

a. Weekly epidemiological record No. 21, 2009, 84, 185–196
World Health Organization, 22 may 2009, 84th year
http://www.who.int/wer/2009/wer8421.pdf

i. 51% of the deaths in Mexico were in the age group 20-39 as of May 20, 2009
ii. 81% of the deaths in Mexico were in the age group 20-59 as of May 20, 2009 and had a 3.6 % Case Fatality Rate (CFR
iii. 2.0 % Case Fatality rate (CFR) for all confirmed cases in Mexico as of May 20, 2009
iv. 54% of the Mexican fatalities were previously healthy people
v. Approximately 2–5% of confirmed cases in the United States and Canada, as well as 6% in Mexico, have been admitted to hospital.
vi. One-third of those hospitalized required mechanical ventilation.
vii. Fever has been absent in some outpatients and in up to 1 in 6 surviving hospitalized patients.
viii. Gastrointestinal symptoms (nausea, vomiting and/or diarrhoea) have occurred in up to 38% of outpatients in the United States.

b. Situación actual de la epidemia
Secretaria de Salud, Mexico, May 19, 2009
http://portal.salud.gob.mx/descargas/pdf/influenza/situacion_actual_epidemia_190509.pdf
i. 77% of deaths are in the 20-54 year age bracket
ii. 88% of the cases had fever

c. Situação epidemiológica da nova influenza A (H1N1) no Brasil, 2009
Secretaria de Vigilância em Saúde, Brazil, August 1, 2009
http://portal.saude.gov.br/portal/arquivos/pdf/informe_influenza_se30_03_08_2009.pdf
Entre os 844 casos de SRAG confirmados para Influenza A(H1N1), 11,4% (96) evoluíram para óbito

d. A preliminary analysis of the epidemiology of influenza A(H1N1) virus infection in Thailand from early outbreak data, June-July 2009
Eurosurveillance, Volume 14, Issue 31, 06 August 2009
http://www.eurosurveillance.org/ViewArticle.aspx?ArticleId=19292

e. Swine flu leaves victims flattened as they stay in intensive care for longer
Grant McArthur, Herald Sun, July 17, 2009
http://www.news.com.au/heraldsun/story/0,21985,25791755-2862,00.html


i. “SWINE flu patients at Victoria's intensive care units are becoming far sicker and taking four times longer to recover than other seriously ill patients.”
ii. “While the average length of stay for intensive care patients is 4.5 days, some of those with swine flu are in ICU for a month.”
iii. "Some of them have been very sick and certainly here, and at The Alfred, some patients have had to go on a heart-lung machine because the mechanical ventilation was insufficient to maintain oxygen levels in the blood.”
iv. “the northern hemisphere will enter winter before a vaccine is available.”

f. Swine flu danger for pregnant women
Janelle Miles, Courier Mail, July 17, 2009
http://www.news.com.au/couriermail/story/0,23739,25794324-3102,00.html
“Pregnant women should quarantine themselves as much as possible during the swine flu outbreak to avoid getting the potentially deadly disease, obstetricians say.”- the Royal Australian and New Zealand College of Obstetricians and Gynaecologists

g. Up to 79 per cent of NZers expected to catch swine flu - study
Martin Johnston, New Zealand Herald, July 24, 2009
http://www.nzherald.co.nz/nz/news/article.cfm?c_id=1&objectid=10586395
“And this suggests nearly 79 per cent of an affected population will catch the virus, although not all will become ill.”

h. Swine flu could hit up to 40 percent in US
Mike Stobbe, Associated Press, July 25, 2009
http://abcnews.go.com/Health/wireStory?id=8171069
“In a disturbing new projection, health officials say up to 40 percent of Americans could get swine flu this year and next and several hundred thousand could die without a successful vaccine campaign and other measures.” (n.b. compare this with the notion that 36000 die from seasonal flu)

i. Neurologic Complications Associated with Novel Influenza A (H1N1) Virus Infection in Children --- Dallas, Texas, May 2009
CDC (Center for Disease Control), July 23, 2009
http://www.cdc.gov/mmwr/preview/mmwrhtml/mm5828a2.htm?s_cid=mm5828a2_e

j. Pregnant Women and Novel Influenza A (H1N1)
Virus: Considerations for Clinicians
CDC, 6/30/09
http://www.cdc.gov/h1n1flu/clinician_pregnant.htm
"Early treatment with influenza antiviral medications is recommended for pregnant women with suspected influenza illness. Clinicians should not wait for test results to initiate treatment since these medications work best if started as early as possible after illness onset."

k. Seeking Lessons in Swine Flu Fight
Lawrence K. Altman, The New York Times, August 10, 2009
http://www.nytimes.com/2009/08/11/health/11docs.html

"But an odd feature of the new virus is the lack of fever in a significant proportion of documented cases, even after some patients become seriously ill. In Chile, it was about half, in Mexico City about a third and elsewhere, less, Dr. Wenzel said. Lack of fever has been noted by other observers in several Canadian cases."

l. Boro prepares for fall’s swine flu cases
Anna Gustafson, Astoria Times, August 13, 2009
http://www.yournabe.com/articles/2009/08/13/astoria_times/news/astoria_times_newsmizhiqz08122009.txt

i. "The Centers for Disease Control has predicted a 2.1 percent to 3.3 percent death rate among those who come down with swine flu this fall, which translates into an additional 52,000 to 86,000 deaths in the city over a three-month period, Kasdan said." (comment: working backwards these numbers also imply a 30% infection rate or CAR)
ii.
“It’s mind-boggling,” Kasdan said of the possible death rate. “Is the CDC right? Who knows — hopefully not. But you need to be prepared.” ([NY] Metropolitan Funeral Directors Association Director Martin Kasdan)

 

36000 debunked

  1. Trends in Pneumonia and Influenza Morbidity and Mortality
    American Ling Association, Research and Scientific Affairs, Epidemiology and Statistics Unit, August 2004
    Table 1 data based on;
    CDC, National Center for Health Statistics, Report of Final Mortality Statistics, 1979-2001

    a. http://www.lungusa.org/atf/cf/%7B7A8D42C2-FCCA-4604-8ADE-7F5D5E762256%7D/PI1.PDF  or

    b. http://74.125.113.132/search?q=cache:EtdmX7GePuQJ:www.lungusa.org/atf/cf/%257B7a8d42c2-fcca-4604-8ade-7f5d5e762256%257D/PNEUMONIA%2520%26%2520INFLUENZA%2520SEPT%25202008.PDF+TRENDS+IN+PNEUMONIA+AND+INFLUENZA+MORBIDITY+AND+MORTALITY&cd=2&hl=en&ct=clnk&gl=us

    Year US Influenza Fatalities
    1979 604
    1981 3006
    1983 1431
    1985 2054
    1987 632
    1989 1593
    1991 1137
    1993 1044
    1995 606
    1996 745
    1997 720
    1998 1724
    1999 1665
    2000 1765
    2001 257
    total 18983
    average 1266
  2. Are U.S. Flu Death Figures More PR Than Science?
    ScienceDaily, December 10, 2005
     http://www.sciencedaily.com/releases/2005/12/051210120020.htm
    "The CDC uses indirect modelling methods to estimate the number of deaths associated with influenza. Thus the much publicised figure of 36,000 is not an estimate of yearly flu deaths, as widely reported in both the lay and scientific press, but an estimate - generated by a model"

  3. A Pandemic of Confusion About Flu's Death Rates
    The Numbers Guy, Wall Street Journal, May 13, 2009
    http://online.wsj.com/article/SB124217724145913411.html

    "According to the CDC's own numbers, influenza was listed as the underlying cause on just 849 death certificates in 2006, the most recent year available -- half as many as hernias and a quarter the number killed by peptic ulcers. This number has been flat in recent decades even as the CDC's much larger estimates of annual flu deaths have been increasing."

  4. Swine flu could hit up to 40 percent in US
    Mike Stobbe, Associated Press, July 25, 2009
    http://abcnews.go.com/Health/wireStory?id=8171069

    a. In a disturbing new projection, health officials say up to 40 percent of Americans could get swine flu this year and next and several hundred thousand could die without a successful vaccine campaign and other measures.

    b. Health officials say flu cases may explode in the fall, when schools open and become germ factories, and the new estimates dramatize the need to have vaccines and other measures in place.

    c. The CDC came up with the new projections for the virus' spread last month, but it was first disclosed in an interview this week with The Associated Press. The estimates are based on a flu pandemic from 1957, which killed nearly 70,000 in the United States but was not as severe as the infamous Spanish flu pandemic of 1918-19. The number of deaths and illnesses from the new swine flu virus would drop if the pandemic peters out or if efforts to slow its spread are successful, said CDC spokesman Tom Skinner. "Hopefully, mitigation efforts will have a big impact on future cases," he said. Besides pushing flu shots, health officials might urge measures such as avoiding crowded places, handwashing, cough covering and timely use of medicines like Tamiflu.
     

  5. Boro prepares for fall’s swine flu cases
    Anna Gustafson, Astoria Times, August 13, 2009
    http://www.yournabe.com/articles/2009/08/13/astoria_times/news/astoria_times_newsmizhiqz08122009.txt

    i. "The Centers for Disease Control has predicted a 2.1 percent to 3.3 percent death rate among those who come down with swine flu this fall, which translates into an additional 52,000 to 86,000 deaths in the city over a three-month period, Kasdan said." (comment: working backwards these numbers also imply a 30% infection rate or CAR)
    ii.
    “It’s mind-boggling,” Kasdan said of the possible death rate. “Is the CDC right? Who knows — hopefully not. But you need to be prepared.” ([NY] Metropolitan Funeral Directors Association Director Martin Kasdan)

  6. read more of the "But it is mild", but not really


     

Countries are now openly speaking of severe disease

1. Forty people a day could die from swine flu by next month
Shan Ross, Scotsman.com, July 4, 2009
http://news.scotsman.com/latestnews/Forty-people-a-day-could.5429067.jp
England is projecting potentially 40 deaths per day in late August.

2. Argentina

a. Swine Flu Death Toll in Argentina Climbs
Alexei Barrionuevo, The New York Times, July 3, 2009
http://www.nytimes.com/2009/07/04/world/americas/04argentina.html?ref=global-home
"Swine flu has killed more people in Argentina than in any other country in South America, where the winter flu season is just beginning. The death rate of 1.6 percent is more than three times the world average, Claudio Zin, the health minister of Buenos Aires Province, said Friday."

b. Ministerio de Salud de la Nacion pone en funcionamiento 28 unidaded moviles hospitalarias para atencion de Gripe A
Ministerio de Salud, Argentina, July 9, 2009
http://www.msal.gov.ar/htm/Site/noticias_plantilla.asp?Id=1476
Argentina’s CFR (case fatality rate) is changing and may now be at 3% using their official numbers (83 per 2677 as of July 9, 2009)

3. USA

a. Boro prepares for fall’s swine flu cases
Anna Gustafson, Astoria Times, August 13, 2009
http://www.yournabe.com/articles/2009/08/13/astoria_times/news/astoria_times_newsmizhiqz08122009.txt

i. "The Centers for Disease Control has predicted a 2.1 percent to 3.3 percent death rate among those who come down with swine flu this fall, which translates into an additional 52,000 to 86,000 deaths in the city over a three-month period, Kasdan said." (comment: working backwards these numbers also imply a 30% infection rate or CAR)
ii.
“It’s mind-boggling,” Kasdan said of the possible death rate. “Is the CDC right? Who knows — hopefully not. But you need to be prepared.” ([NY] Metropolitan Funeral Directors Association Director Martin Kasdan)
 

 

Schools and other focal points

  1. Swine flu could hit up to 40 percent in US
    Mike Stobbe, Associated Press, July 25, 2009
    http://abcnews.go.com/Health/wireStory?id=8171069

    "Health officials say flu cases may explode in the fall, when schools open and become germ factories, and the new estimates dramatize the need to have vaccines and other measures in place."

     

  2. Widespread Pandemic H1N1 School Outbreaks in Southern US
    Henry Niman, Recombinomics, August 20, 2009
    http://www.recombinomics.com/News/08200901/H1N1_South_School.html

    a. Large outbreaks are expected nationwide, as students return to the school in the next few weeks.

    b. Most schools are following CDC recommendations and remaining open, while offering guidance centered on keeping ill students at home.  However, these guidelines are tightly linked to a fever, which is in the CDC H1N1 swine flu case definition.  The association of fever with swine flu infections is tenuous, and some countries like Chile, are reporting 50% of patients without fever, even in more severe cases.  Similarly, initial data from Mexico also noted that 30% of confirmed cases did not have a fever, raising concerns that these figures are low, and most infections have no or low fever. 

    c. Thus, the policy of keeping schools open, and using fever as one of the key symptoms, may lead to extensive spread by patients who have low or no fever.  Moreover, most of the students have mild illnesses, so they are not tested, which may allow important genetic changes to silently spread.  One such change is H274Y, which confers Tamiflu resistance.  Many of the confirmed cases have quickly developed resistance, raising concerns the H274Y is widespread, but present as a minor species which is largely undetected in samples collected prior to Tamiflu treatment.
     

  3. Study of infections per age group
    http://cdc.gov/h1n1flu/images/graphs/qa_graphA.gif

     
  4. Raise Your Flu IQ

    Daniel J. DeNoon, WebMD Health News, December 5, 2003
    http://www.webmd.com/cold-and-flu/news/20031205/raise-your-flu-iq

    Question: How long are you contagious?
    Dr. Clements: Most adults are contagious for about five to seven days. With young children, it's longer. The youngest kids (1 to 2 year olds) can be contagious for 10-14 days. And they can also have diarrheal illness when they get the flu. They get more symptoms that we adults typically have.  Note: According to the CDC, people with lowered immune systems -- such as people with AIDS or people taking drugs to prevent transplant rejection -- can shed flu virus for weeks or months after infection.

 

High risk groups

  1. Study of fatalities by age group

    a. CDC
    http://cdc.gov/h1n1flu/images/graphs/qa_graphC.gif

    b. Thailand
    http://www.eurosurveillance.org/images/dynamic/EE/V14N30/Thailand_Fig2.jpg

     

  2. Pregnancy

    a. Swine flu danger for pregnant women
    Janelle Miles, Courier Mail, July 17, 2009
    http://www.news.com.au/couriermail/story/0,23739,25794324-3102,00.html
    “Pregnant women should quarantine themselves as much as possible during the swine flu outbreak to avoid getting the potentially deadly disease, obstetricians say.”- the Royal Australian and New Zealand College of Obstetricians and Gynaecologists

    b. Pregnant Women and Novel Influenza A (H1N1)
    Virus: Considerations for Clinicians
    CDC, 6/30/09
    http://www.cdc.gov/h1n1flu/clinician_pregnant.htm
    "Early treatment with influenza antiviral medications is recommended for pregnant women with suspected influenza illness. Clinicians should not wait for test results to initiate treatment since these medications work best if started as early as possible after illness onset."

    c. Situação epidemiológica da nova influenza A (H1N1) no Brasil, 2009
    Secretaria de Vigilância em Saúde, Brazil, August 1, 2009
    http://portal.saude.gov.br/portal/arquivos/pdf/informe_influenza_se30_03_08_2009.pdf
    39.5% of the fatal respiratory cases caused by H1N1 were pregnant.

 

Attack rate, Testing, and Data Reporting

1. Attack Rate:

a. “Novel” A(H1N1) influenza situation, New York, USA
EpiSouth, 5/1/09
http://www.episouth.org/download.php?&id=7806
33% Symptomatic

b. CDC Briefing on Investigation of Human Cases of H1N1 Flu (transcript)
Centers for Disease Control and Prevention (CDC), July 24, 2009
http://www.cdc.gov/media/transcripts/2009/t090724.htm


i. Anne Schuchat: Okay. The 40% figure that I gave was not about illness. what I was trying to say was our planning assumptions for a severe pandemic were that at a certain period up to 40% of the workforce might be affected and not able to work either because they were ill or because they needed to stay home to care for an ill family member. So a lot of that is the ill family member, not the worker themselves. The second question that you asked -- I'm just forgetting what it was. I'm sorry.
ii. Joanne Silberner: How does the 6% to 8% attack rate compare with seasonal flu?
iii. Anne Schuchat: It's difficult to compare that. One reason that it's difficult is that 6% to 8% attack rate occurs in the May to June period when there was zero cases of seasonal influenza. To some some extent we were seeing a lot of transmission when the circumstances weren't that great for transmission. During seasonal influenza, the winter months, we might see rates of 10% to 15% of people developing influenza-like illness. And so what we saw in that sort of three to four-week period with the 6% to 8% was probably just a glimpse of what might happen over the longer winter season when transmission circumstances like temperature are different. So it's really an apples and oranges comparison.
 

2. Data Reporting:

a. Pandemic (H1N1) 2009 briefing note 3 (revised)
World Health Organization, July 16 2009
http://www.who.int/csr/disease/swineflu/notes/h1n1_surveillance_20090710/en/index.html

i. The WHO will no longer issue the global tables showing the number of confirmed cases for all countries.
ii. For countries already experiencing community-wide transmission, the focus of surveillance activities will shift to reporting against the established indicators for the monitoring of seasonal influenza activity. Those countries are no longer required to submit regular reports of individual laboratory-confirmed cases to the WHO.

b. Why did the CDC stop reporting individual confirmed and probable novel H1N1 Flu cases?
Pandemicflu.gov
http://www.pandemicflu.gov/faq/swineflu/sf039.html

i. Thus, on July 24, 2009 CDC transitioned from reporting probable and confirmed case counts to only reporting regional disease activity levels using its seasonal surveillance systems to track the progress of the novel H1N1 flu outbreak. (see also http://www.cdc.gov/media/transcripts/2009/t090724.htm) This form of reporting disease activity levels is the method CDC uses to report on routine seasonal flu activity, which does not count individual cases, but instead monitors activity levels and virus characteristics through nine nationwide surveillance systems. Results from these systems are updated weekly and are posted on the CDC website on Fridays at www.cdc.gov/flu.
ii. We have been saying for some time that this change would eventually happen. We recognize that individual case counts are easy to understand and desirable, but these indicators represent a significant underestimate of overall disease burden and spread in the United States. CDC will continue report the total number of novel H1N1 flu hospitalizations and deaths each week.
 

3. Testing:

a. Political/economic influences: If you don’t test, you don’t confirm the disease or a high death rate. The data can be skewed.

b. Health Alert #27, 2009
New York City Department of Health and Mental Hygiene, July 8, 2009
http://www.nyc.gov/html/doh/downloads/pdf/cd/2009/09md27.pdf
Preliminary data from an outpatient ILI surveillance project being conducted by DOHMH in collaboration with the Institute for Family Health and Columbia University show that among 114 patients presenting with febrile or respiratory illness since the end of May 2009 who had results available, 61 (54%) were positive for pandemic H1N1 by PCR testing at Columbia University, with declining incidence of pandemic H1N1 in recent weeks. Rapid test (EIA) had low sensitivity, only detecting 17 (28%) of these cases.

c. Swine flu tests must be repeated, medics told
Ella Lee, South China Morning Post, Jul 25, 2009
http://www.scmp.com

i. Dr Tsang, convenor of the public hospital laboratories network, said a review of severe cases showed that the virus load in the upper respiratory tracts would drop by half three to four days after the onset of the illness.
ii. "The virus load is almost zero on the seventh or eighth day after the onset, meaning that a test of their nasal fluid after that period could turn out to be a false negative," he said. "In that situation, a specimen from the lower respiratory tract should be taken for tests."
iii. Another rapid test, the antigen test, which takes only one hour to complete, is not being used. Dr Tsang said the test could only tell whether a patient had contracted influenza A, of which swine flu is a form, and was only 60 to 70 per cent accurate. "We don't use this test in swine flu because of its high false-negative rate."

d. Quick Tests for the Flu Found Often Inaccurate
Andrew Pollack, The New York Times, August 6, 2009
http://www.nytimes.com/2009/08/06/health/06flu.html?_r=2&ref=business&pagewanted=print

i. In a study published recently in The Journal of Clinical Virology, Dr. Ginocchio found that one rapid test detected only 10 percent of the swine flu infections that could be picked up by a more sophisticated laboratory culture. A different rapid test detected 40 percent. (Dr. Ginocchio is a consultant to Luminex Corporation, a company that makes a more accurate but slower test.)
ii. The federal Centers for Disease Control and Prevention is expected to publish its own study of the rapid tests soon. Last week, it updated guidance urging doctors to be cautious in relying on the tests.
iii. “We’re saying you need to understand the limitations of these tests,” Dr. Timothy M. Uyeki, an author of the C.D.C. guidance, said in an interview. “The clinician should not base a decision to treat or not treat on the basis of a negative result.”

e. Interim Guidance for the Detection of Novel Influenza A Virus Using Rapid Influenza Diagnostic Tests
Centers for Disease Control and Prevention (CDC), July 29, 2009
http://www.cdc.gov/h1n1flu/guidance/rapid_testing.htm

i. Rapid Influenza Diagnostic Tests:
Compared to RT-PCR, the sensitivity of RIDTs for detecting novel influenza A (H1N1) virus infections ranged from 10-70%. Therefore, a negative RIDT result does not rule out novel influenza A (H1N1) virus infection.
ii. The Role of RIDT for Detecting Novel H1N1: Clinical Considerations:
A RIDT may provide useful information that might impact on patient care (Figure). However, understanding the limitations of RIDTs is very important to appropriately interpret results for clinical management. When influenza viruses are circulating in a community, a positive test result indicates that influenza virus infection is likely present in the specimen. Knowledge of the presence of influenza A or B virus infection can help to inform influenza treatment decisions. However, a negative rapid test result does not rule out influenza virus infection. Since false negative results can occur, if clinical suspicion of influenza is high in a patient who tests negative by RIDT (or if RIDT is not offered), empiric antiviral therapy should be administered, if appropriate, and infection control measures implemented. Guidance on the use of influenza antiviral agents is available at: http://www.cdc.gov/h1n1flu/recommendations.htm. In settings where policies indicate exclusion of patients who may have influenza (e.g., schools, camps, day care centers), a negative RIDT, performed on a patient with clinically compatible illness, should not be used as justification for early return to that setting. Finally, a negative RIDT result can not exclude influenza as a cause of an outbreak in a facility with ill residents or patients with clinically compatible illness.

http://www.cdc.gov/h1n1flu/images/rid_tests01.gif (flowchart below but, N.B. Fever present in only 50% cases in Chile, 70% Mexico... http://www.nytimes.com/2009/08/11/health/11docs.html)

 

Antiviral drug resistance (drug becomes ineffective)
Asymptomatic Traveler With Tamiflu Resistant Pandemic H1N1
Recombinomics, July 4, 2009
http://www.recombinomics.com/News/07040901/H274Y_Asymptomatic.html


 

Anti-viral drug supply (Tamiflu and Relenza) is very limited

1. Sales of Flu Drug Improve Results at Roche
Andrew Pollack, New York Times, July 23, 2009
http://www.nytimes.com/2009/07/24/business/24roche.html

a. “Still, Mr. Schwan [Roche CEO] said that Roche, in cooperation with outside contractors, would increase its manufacturing capacity to 400 million packs a year by the beginning of 2010, about four times the current capacity.”

b. “He said that should be an ample volume, given that the company sold a total of only 300 million packs during the last five years — a period that encompassed a bird flu scare as well as the current swine flu outbreak.”

c. “Glaxo said it planned to triple its manufacturing capacity for Relenza by the end of the year to 190 million treatments annually.”

2. notes:

a. One Tamiflu “pack” = one treatment course = 10 doses (2 per day for 5 days), so Roche is probably speaking about 400 million courses in production per year in 2010.
b. One course of treatment may not be enough to treat infection
c. People may receive multiple infections in a year due to flu mutation
d. Hundreds of thousands of courses are being used globally to avoid infection. There may be much less antiviral medication available in reality.

3. 100 million antiviral treatment courses will be available this fall
CIDRAP, August 14, 2009
http://www.cidrap.umn.edu/cidrap/content/influenza/swineflu/news/aug1409vaccine.html
"In an update on the nation's antiviral stockpiles, Robin said that 84 million treatment courses are currently in federal and state stockpiles and that 3 million more doses are expected soon. He projected that a total of 100 million antiviral treatment courses will be available this fall, but he added that only a small amount will be available commercially."

4. older news
Obama Admin. Releases Stockpile of Antiflu Virus Drug
John Hendren, ABC News, April 26, 2009
http://abcnews.go.com/Health/ColdandFluNews/story?id=7434061&page=1
50,000,000 treatment courses in the USA Government anti-viral stockpile, but much may have been used.


 

Pandemics strike in waves

http://www.cdc.gov/ncidod/eid/vol12no01/05-0979-G1.htm

 


Vaccine

1. Vaccines for the new Influenza A (H1N1)
World Health Organization, Up-to-date as of 27-May-2009
http://www.who.int/csr/disease/swineflu/frequently_asked_questions/vaccine_preparedness/en/index.html
“a global survey made by WHO on May 15, 2009, a maximum 4.9 billion could be produced in 12 months. This would only be the case if a number of conditions are met— notably that production yields for influenza A (H1N1) vaccine are equivalent to those usually obtained for seasonal vaccines, and that manufacturers use the vaccine formulation which has been shown for H5N1 influenza as being the most "dose-sparing" (i.e. those which use the smaller quantity of active principle). A more conservative estimate of global capacity is at least 1 to 2 billion doses per year. This does not translate automatically into numbers of persons vaccinated, as we do not yet know how many doses of the vaccine will be needed to achieve protection.”



2. Swine flu vaccine production hits a snag: yield so far is 'less than optimal'
Helen Branswell, The Canadian Press, July 12, 2009
http://www.google.com/hostednews/canadianpress/article/ALeqM5hJMZ2o0rf1lyVv_1ZIxwdlZOqJuQ
"The World Health Organization says so far the yield for egg-based production is half or less what manufacturers get when they make vaccine to protect against seasonal H1N1 viruses."


3. Flu Vaccine Production Hits Snag
Jeanne Whalen, The Wall Street Journal, July 17, 2009
http://online.wsj.com/article/SB124778234560554209.html

a. “But the H1N1 virus being used for swine-flu vaccine is so far yielding a "low" level of antigen, Swiss drug maker Novartis AG said Thursday. It said the yield so far is about 30% to 50% of what the company normally gets for seasonal flu vaccines.”

b. Robert Parkinson, chief executive of Baxter International Inc. of Deerfield, Ill., also described "yield optimization" Thursday as a challenge.

4. WHO: Full Pandemic Flu Vaccine Production To Start In 2 Weeks
Anita Greil, Dow Jones Newswires, June 11, 2009
http://online.wsj.com/article/BT-CO-20090611-711589.html
Vaccine production is starting in July 2009 more or less

5. Officials lower expectations for size of first novel flu vaccine deliveries
CIDRAP, August 14, 2009
http://www.cidrap.umn.edu/cidrap/content/influenza/swineflu/news/aug1409vaccine.html
"Federal officials today during a pandemic H1N1 planning update dialed back the number of novel flu vaccine doses they expect in October from 120 million to 45 million, listing several reasons for the smaller projection.

a. During a late July meeting of a federal immunization advisory panel, which targeted 159 million people to receive the first doses, authorities projected that 120 million doses would be available in October, with another 80 million per month in the following months.

b. However, during a National Biodefense Safety Board (NBSB) teleconference today, Dr. Robin Robinson, director of the Biological Advanced Research and Development Authority (BARDA) at the US Department of Health and Human Services (HHS), said the latest expectation is 45 million doses by mid October, with manufacturers delivering 20 million doses per week after that.

c. He said the revised estimate is based on several factors expected to slow vaccine delivery from manufacturers. Health officials have already acknowledged that yields of the novel H1N1 antigen are less than for the seasonal flu vaccine. Robinson also said vaccine makers have a limited number of fill-and-finish sites, which are just completing seasonal flu vaccine production, but that federal officials are looking for ways to maximize the current capacity."

6. UK swine flu cases third worst in the world
Stephanie Busari, CNN, July 10, 2009
http://edition.cnn.com/2009/HEALTH/07/10/swine.flu.uk/index.html?iref=mpstoryview
They don’t know yet how many doses each person needs but The UK NHS is planning to use double doses.

7. Legacy of 1976 swine flu outbreak led to Canada's pandemic vaccine contract
Helen Branswell, The Canadian Press, July 17, 2009
http://www.google.com/hostednews/canadianpress/article/ALeqM5gHmjskDrW9P8WGnQ2XHa64Zs56CA
“Canada had the first national pandemic plan and the first pandemic vaccine contract. And when GSK's production line starts pumping out pandemic vaccine, the plant will be producing more than what Canada needs.”  

8. Vaccine Allocation Tiers in USA (as of July 18, 2009)
http://www.pandemicflu.gov/vaccine/allocationguidance.pdf



 

Severity, Calculations, and Response

1. Graphics from the Department of Homeland Security

a. http://www.pandemicflu.gov/plan/community/community_mitigation.pdf

b. http://www.pandemicflu.gov/images/clip_image002_com.jpg

c. http://www.pandemicflu.gov/images/clip_image004_com.jpg

2. The National Influenza Vaccine Summit 2009 Meeting

a. http://www.ccldhe.org/resources/2009_InfluenzaSummitUpdate.pdf
b. http://www.preventinfluenza.org/nivs_summ_2009.asp

3. Calculations:

 

 

Some links

  1. Great Flu presentations

a. Pandemic Influenza: What we all need to know
Kathy M. Williams RN, BS
http://www.studentsprepamerica.org/docs/Pandemic_Influenza_H1N1_&_H5N1_V2.ppt
b. Good summary post as of August 2009
http://www.singtomeohmuse.com/viewtopic.php?t=3577&postdays=0&postorder=asc&start=0

c. Influenza A (H1 N1) Master Update Ver 30.3 July 3 2009
Michael Fraser, RN
Irish First Point Responder Unit
http://www.slideshare.net/Bilogical/influenza-a-h1-n1-master-update-ver-303-july-3-2009

2. Flu cases data

a. N.B. Expect much less clear data after July 16, 2009
“The WHO will no longer issue the global table showing the numbers of confirmed cases for all cases,”
http://www.who.int/csr/disease/swineflu/notes/h1n1_surveillance_20090710/en/index.html
b. http://en.wikipedia.org/wiki/2009_H1N1_influenza_outbreak
c. http://www.peterosborn.com/pandemic.htm
d. http://spreadsheets.google.com/ccc?key=rZIWyvI97h892s2bmCVlm6A
e. http://homepage.mac.com/monotreme1/Outbreak%20folder/H1N1Outbreaks.html
f. http://www.cdc.gov/h1n1flu/update.htm
g. http://wonder.cdc.gov/mmwr/mmwrmort.asp

3. Flu discussion forums and blogs

http://pfiforum.com
http://monotreme1000.wordpress.com
http://www.flutrackers.com/forum/index.php
http://www.fluwiki.info
http://www.curevents.com/vb/forumdisplay.php?f=40

4. Flu news - current

a. aggregator (streaming)

http://www.newsnow.co.uk/h/?JavaScript=1&search=H1N1
http://www.newsnow.co.uk/h/?JavaScript=1&search=gripe
http://www.newsnow.co.uk/h/Business+%26+Finance/Industry+Sectors/Agriculture/Bird+Flu

b. School closings
http://news.google.com/news?pz=1&ned=us&hl=en&as_maxm=4&q=school+shut+OR+closed&as_qdr=d&as_drrb=q&as_mind=27&as_minm=3&cf=all&as_maxd=26&scoring=n

5. Flu researchers

a. http://www.recombinomics.com/whats_new.html

6. Flu infections maps (currently have frequent updates during each day)

a. Niman and Rhiza Map
http://flutracker.rhizalabs.com/
b. A Google map
http://maps.google.com/maps/ms?ie=UTF8&hl=en&source=embed&msa=0&msid=109496610648025582911.0004686892fbefe515012&ll=43.580391,-53.085937&spn=90.39,228.515625&t=h&z=3

7. Emergency preparedness

http://www.singtomeohmuse.com/viewtopic.php?t=3235
http://www.curevents.com/vb/forumdisplay.php?f=23
http://www.planforpandemic.com/
http://getpandemicready.org/
http://www.youtube.com/user/NHPandemicPlanner#play/uploads/10/fcCfzvYBo2c
http://www.singtomeohmuse.com/parent/wiki%20files/Becoming_Self-Sufficient%5B1%5D.pdf

8. Official government sites

a. Argentina- Health Department notices http://www.msal.gov.ar/htm/site/default.asp
b. Mexico, Secretaria de Salud http://portal.salud.gob.mx/
c. UK- National Health Service http://www.nhs.uk/Pages/HomePage.aspx
d. United Nations- WHO (World Health Organization) http://www.who.int/en/
e. USA
i. CDC news (Center for Disease Control) http://www.cdc.gov/swineflu/whatsnew.htm
ii. Department of HHS and CDC http://www.pandemicflu.gov/
iii. Los Alamos National Laboratory flu wave simulation http://www.lanl.gov/news/images/bird4x3red.mov
iv. CIDRAP http://www.cidrap.umn.edu/