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Publications and Posters
- Goltsman, E., V.R.Singan, et. al. (2007) In-Silico Methods for Troubleshooting Genomic Shotgun Data, Second Annual DOE Joint Genome Institute User Meeting, Poster - Walnut Creek, CA.
- Udwary, D.W., V.R.Singan, et. al. (2007) Genome Sequencing reveals complex secondary metabolome in the marine actinomycete Salinospora tropica, Proceedings of the National Academy of Science of the United States of America (PNAS) 2007, doi:10.1073/pnas.0700962104. .[PDF]
- Chen, F., V.R.Singan, et. al. (2006) 454 Sequencing Is an Effective Method for Gap Closure in Microbial Whole Genome Shotgun Sequencing, Genomes, Medicine and the Environment Hilton Head Island, Poster -Hilton Head Island, SC.
- Singan, V.R, S. Trong, et. al. (2006) Assembler Complementation Tool, First Annual Finishing in the Future - Santa Fe, Poster-Santa Fe, NM.
- Goltsman, E., V.R.Singan, et. al. (2006) Statistical Methods for Troubleshooting of Genomic Shotgun Data, First Annual Finishing in the Future - Santa Fe, Poster - Santa Fe, NM.
- Trong, S., V.R. Singan, et. al. (2005) Comparison of Whole Genome Shotgun Assemblers. CAR Showcase, Lawrence Livermore National Laboratory, Poster-Livermore.
- Chen, F., V.R.Singan, et. al. (2006) Comparison of 454 Sequencing Platform with Traditional Sanger Sequencing: a Case Study with de novo Sequencing of Prochlorococcus marinus NATL2A Genome. Plant and Animal Genome (PAG) Conference.[PDF]
- Gilbert, D., V.R. Singan and J.K. Colbourne. wFleaBase: the Daphnia genomics information system. Available online via: http://wFleaBase.org, BMC Bioinformatics 2005, 6:45 doi: 10.1186/1471-2105/6/45. [PDF]
- Gilbert, D., V.R. Singan, et. al., Argos, a replicable genome information system for Flybase, euGenes and other databases, in preparation. [PDF]
- Singan, V.R., J.K. Colbourne, (2005) MicrosatDesign: A pipeline tool for transforming sequencer trace files into DNA markers, CGB Technical Report. [PDF]
- Seki, K., J. Costello, V.R. Singan, J. Mostafa (2004). TREC 2004 Genomics track experiments at IUB. At the proceedings of the thirteenth Text REtrieval Conference (TREC 2004). [PDF]
- Gilbert, D., Singan, V.R., et. al., (2004) ARGOS: A Replicable Genome infOrmation System for Flybase and wFleaBase,
First Annual Indiana Bioinformaticians Conference, Poster-Indianapolis. [PPT]- Singan, V.R., H.A. Sheth, et. al., (2004) Literature Based Gene Disease Relationship Discovery Tool, First Annual Indiana Bioinformaticians Conference, Poster-Indianapolis. [PPT]